Gene : Phvul.009G093400 P. vulgaris v2.1
Defline:  (1 of 5) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Genomic Order:  965
Name:  ? Phvul.009G093400 Secondary Identifier:  ? PAC:37151382
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPASYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7039 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G093400 0.5kb upstream 0.5kb upstream 3946 true Chr09: 14850024-14853969 Phaseolus vulgaris
Phvul.009G093400 0.5kb upstream 0.5kb upstream 500 false Chr09: 14853470-14853969 Phaseolus vulgaris
Phvul.009G093400 0.5kb downstream 0.5kb downstream 3946 true Chr09: 14849524-14853469 Phaseolus vulgaris
Phvul.009G093400 0.5kb downstream 0.5kb downstream 500 false Chr09: 14849524-14850023 Phaseolus vulgaris
Phvul.009G093400 1.0kb upstream 1.0kb upstream 4446 true Chr09: 14850024-14854469 Phaseolus vulgaris
Phvul.009G093400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14853470-14854469 Phaseolus vulgaris
Phvul.009G093400 1.0kb downstream 1.0kb downstream 4446 true Chr09: 14849024-14853469 Phaseolus vulgaris
Phvul.009G093400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14849024-14850023 Phaseolus vulgaris
Phvul.009G093400 2.0kb upstream 2.0kb upstream 5446 true Chr09: 14850024-14855469 Phaseolus vulgaris
Phvul.009G093400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14853470-14855469 Phaseolus vulgaris
Phvul.009G093400 2.0kb downstream 2.0kb downstream 5446 true Chr09: 14848024-14853469 Phaseolus vulgaris
Phvul.009G093400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14848024-14850023 Phaseolus vulgaris
Phvul.009G093400 5.0kb upstream 5.0kb upstream 8446 true Chr09: 14850024-14858469 Phaseolus vulgaris
Phvul.009G093400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14853470-14858469 Phaseolus vulgaris
Phvul.009G093400 5.0kb downstream 5.0kb downstream 8446 true Chr09: 14845024-14853469 Phaseolus vulgaris
Phvul.009G093400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14845024-14850023 Phaseolus vulgaris
Phvul.009G093400 10.0kb upstream 10.0kb upstream 13446 true Chr09: 14850024-14863469 Phaseolus vulgaris
Phvul.009G093400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14853470-14863469 Phaseolus vulgaris
Phvul.009G093400 10.0kb downstream 10.0kb downstream 13446 true Chr09: 14840024-14853469 Phaseolus vulgaris
Phvul.009G093400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14840024-14850023 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780184 5273 Angiosperm View MSA
122296230 5265 Fabidae View MSA
124050775 5270 Rosid View MSA
123745391 5271 Pentapetalae View MSA
122771485 5272 Eudicot View MSA
121051807 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.111451 0.0 0.444634 Low  
cufflinks 0.246134 0.0 1.63555 Low  
cufflinks 1.13692 0.0 5.04712    
cufflinks 0.572848 0.0 2.41609    
cufflinks 0.985591 0.0 3.49602    
cufflinks 0.221539 0.0 1.03801 Low  
cufflinks 1.27267 0.0 5.43488    
cufflinks 0.355426 0.0 2.09277 Low  
cufflinks 2.0889 0.0 7.94772   High
cufflinks 0.00585869 0.0 0.0430182 Low Low
cufflinks 0.740965 0.0 3.70515    

0 Strain