Gene : Phvul.006G184400 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  1857
Name:  ? Phvul.006G184400 Secondary Identifier:  ? PAC:37172681
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G184400 0.5kb upstream 0.5kb upstream 1605 true Chr06: 28560945-28562549 Phaseolus vulgaris
Phvul.006G184400 0.5kb upstream 0.5kb upstream 500 false Chr06: 28562050-28562549 Phaseolus vulgaris
Phvul.006G184400 0.5kb downstream 0.5kb downstream 1605 true Chr06: 28560445-28562049 Phaseolus vulgaris
Phvul.006G184400 0.5kb downstream 0.5kb downstream 500 false Chr06: 28560445-28560944 Phaseolus vulgaris
Phvul.006G184400 1.0kb upstream 1.0kb upstream 2105 true Chr06: 28560945-28563049 Phaseolus vulgaris
Phvul.006G184400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28562050-28563049 Phaseolus vulgaris
Phvul.006G184400 1.0kb downstream 1.0kb downstream 2105 true Chr06: 28559945-28562049 Phaseolus vulgaris
Phvul.006G184400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28559945-28560944 Phaseolus vulgaris
Phvul.006G184400 2.0kb upstream 2.0kb upstream 3105 true Chr06: 28560945-28564049 Phaseolus vulgaris
Phvul.006G184400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28562050-28564049 Phaseolus vulgaris
Phvul.006G184400 2.0kb downstream 2.0kb downstream 3105 true Chr06: 28558945-28562049 Phaseolus vulgaris
Phvul.006G184400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28558945-28560944 Phaseolus vulgaris
Phvul.006G184400 5.0kb upstream 5.0kb upstream 6105 true Chr06: 28560945-28567049 Phaseolus vulgaris
Phvul.006G184400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28562050-28567049 Phaseolus vulgaris
Phvul.006G184400 5.0kb downstream 5.0kb downstream 6105 true Chr06: 28555945-28562049 Phaseolus vulgaris
Phvul.006G184400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28555945-28560944 Phaseolus vulgaris
Phvul.006G184400 10.0kb upstream 10.0kb upstream 11105 true Chr06: 28560945-28572049 Phaseolus vulgaris
Phvul.006G184400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28562050-28572049 Phaseolus vulgaris
Phvul.006G184400 10.0kb downstream 10.0kb downstream 11105 true Chr06: 28550945-28562049 Phaseolus vulgaris
Phvul.006G184400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28550945-28560944 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.8382 0.0 80.6881    
cufflinks 30.258 0.0 79.427    
cufflinks 54.7101 0.0 141.417 High  
cufflinks 60.4102 0.0 156.686 High  
cufflinks 101.252 0.0 269.17 High High
cufflinks 48.1091 0.0 124.409 High  
cufflinks 25.8515 0.0 67.9694    
cufflinks 19.9174 0.0 53.6518    
cufflinks 20.9588 0.0 55.8884    
cufflinks 15.4288 0.0 42.6454   Low
cufflinks 113.37 0.0 302.245 High High

0 Strain