Gene : Phvul.006G184500 P. vulgaris v2.1
Defline:  (1 of 1) K03251 - translation initiation factor 3 subunit D (EIF3D) Genomic Order:  1858
Name:  ? Phvul.006G184500 Secondary Identifier:  ? PAC:37173749
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G184500 0.5kb upstream 0.5kb upstream 3782 true Chr06: 28570362-28574143 Phaseolus vulgaris
Phvul.006G184500 0.5kb upstream 0.5kb upstream 500 false Chr06: 28573644-28574143 Phaseolus vulgaris
Phvul.006G184500 0.5kb downstream 0.5kb downstream 3782 true Chr06: 28569862-28573643 Phaseolus vulgaris
Phvul.006G184500 0.5kb downstream 0.5kb downstream 500 false Chr06: 28569862-28570361 Phaseolus vulgaris
Phvul.006G184500 1.0kb upstream 1.0kb upstream 4282 true Chr06: 28570362-28574643 Phaseolus vulgaris
Phvul.006G184500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28573644-28574643 Phaseolus vulgaris
Phvul.006G184500 1.0kb downstream 1.0kb downstream 4282 true Chr06: 28569362-28573643 Phaseolus vulgaris
Phvul.006G184500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28569362-28570361 Phaseolus vulgaris
Phvul.006G184500 2.0kb upstream 2.0kb upstream 5282 true Chr06: 28570362-28575643 Phaseolus vulgaris
Phvul.006G184500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28573644-28575643 Phaseolus vulgaris
Phvul.006G184500 2.0kb downstream 2.0kb downstream 5282 true Chr06: 28568362-28573643 Phaseolus vulgaris
Phvul.006G184500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28568362-28570361 Phaseolus vulgaris
Phvul.006G184500 5.0kb upstream 5.0kb upstream 8282 true Chr06: 28570362-28578643 Phaseolus vulgaris
Phvul.006G184500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28573644-28578643 Phaseolus vulgaris
Phvul.006G184500 5.0kb downstream 5.0kb downstream 8282 true Chr06: 28565362-28573643 Phaseolus vulgaris
Phvul.006G184500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28565362-28570361 Phaseolus vulgaris
Phvul.006G184500 10.0kb upstream 10.0kb upstream 13282 true Chr06: 28570362-28583643 Phaseolus vulgaris
Phvul.006G184500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28573644-28583643 Phaseolus vulgaris
Phvul.006G184500 10.0kb downstream 10.0kb downstream 13282 true Chr06: 28560362-28573643 Phaseolus vulgaris
Phvul.006G184500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28560362-28570361 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041522 5273 Angiosperm View MSA
122304008 5265 Fabidae View MSA
124061322 5270 Rosid View MSA
123739526 5271 Pentapetalae View MSA
122787670 5272 Eudicot View MSA
121344825 5274 Embryophyte View MSA
123426210 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.2762 0.0 124.295 High Low
cufflinks 99.8971 0.0 290.425 High High
cufflinks 63.5098 0.0 174.854 High  
cufflinks 77.1587 0.0 217.793 High  
cufflinks 88.6707 0.0 255.425 High  
cufflinks 68.2686 0.0 189.818 High  
cufflinks 67.5472 0.0 188.557 High  
cufflinks 75.4702 0.0 212.384 High  
cufflinks 80.0168 0.0 226.842 High  
cufflinks 78.3347 0.0 221.328 High  
cufflinks 101.064 0.0 295.242 High High

0 Strain