Gene : Phvul.006G184900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31561:SF21 - 3-KETOACYL-COA SYNTHASE 15 Genomic Order:  1862
Name:  ? Phvul.006G184900 Secondary Identifier:  ? PAC:37173997
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G184900 0.5kb upstream 0.5kb upstream 3085 true Chr06: 28607300-28610384 Phaseolus vulgaris
Phvul.006G184900 0.5kb upstream 0.5kb upstream 500 false Chr06: 28609885-28610384 Phaseolus vulgaris
Phvul.006G184900 0.5kb downstream 0.5kb downstream 3085 true Chr06: 28606800-28609884 Phaseolus vulgaris
Phvul.006G184900 0.5kb downstream 0.5kb downstream 500 false Chr06: 28606800-28607299 Phaseolus vulgaris
Phvul.006G184900 1.0kb upstream 1.0kb upstream 3585 true Chr06: 28607300-28610884 Phaseolus vulgaris
Phvul.006G184900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28609885-28610884 Phaseolus vulgaris
Phvul.006G184900 1.0kb downstream 1.0kb downstream 3585 true Chr06: 28606300-28609884 Phaseolus vulgaris
Phvul.006G184900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28606300-28607299 Phaseolus vulgaris
Phvul.006G184900 2.0kb upstream 2.0kb upstream 4585 true Chr06: 28607300-28611884 Phaseolus vulgaris
Phvul.006G184900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28609885-28611884 Phaseolus vulgaris
Phvul.006G184900 2.0kb downstream 2.0kb downstream 4585 true Chr06: 28605300-28609884 Phaseolus vulgaris
Phvul.006G184900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28605300-28607299 Phaseolus vulgaris
Phvul.006G184900 5.0kb upstream 5.0kb upstream 7585 true Chr06: 28607300-28614884 Phaseolus vulgaris
Phvul.006G184900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28609885-28614884 Phaseolus vulgaris
Phvul.006G184900 5.0kb downstream 5.0kb downstream 7585 true Chr06: 28602300-28609884 Phaseolus vulgaris
Phvul.006G184900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28602300-28607299 Phaseolus vulgaris
Phvul.006G184900 10.0kb upstream 10.0kb upstream 12585 true Chr06: 28607300-28619884 Phaseolus vulgaris
Phvul.006G184900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28609885-28619884 Phaseolus vulgaris
Phvul.006G184900 10.0kb downstream 10.0kb downstream 12585 true Chr06: 28597300-28609884 Phaseolus vulgaris
Phvul.006G184900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28597300-28607299 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791805 5273 Angiosperm View MSA
122299416 5265 Fabidae View MSA
124070288 5270 Rosid View MSA
123742604 5271 Pentapetalae View MSA
122793984 5272 Eudicot View MSA
121063095 5274 Embryophyte View MSA
123102879 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.141273 0.0 0.572424 Low  
cufflinks 0.0981482 0.0 0.409529 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.338207 0.0 1.28435 Low  
cufflinks 0.062268 0.0 0.272726 Low  
cufflinks 0.425935 0.0 1.57945 Low High
cufflinks 0.0583657 0.0 0.255327 Low  
cufflinks 0.0138859 0.0 0.0703075 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0185731 0.0 0.0916773 Low Low
cufflinks 0.514058 0.0 1.88537 Low High

0 Strain