Gene : Phvul.009G087100 P. vulgaris v2.1
Defline:  (1 of 1) K16252 - DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] (NRPD2, NRPE2) Genomic Order:  896
Name:  ? Phvul.009G087100 Secondary Identifier:  ? PAC:37151768
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G087100 0.5kb upstream 0.5kb upstream 6076 true Chr09: 14088430-14094505 Phaseolus vulgaris
Phvul.009G087100 0.5kb upstream 0.5kb upstream 500 false Chr09: 14094006-14094505 Phaseolus vulgaris
Phvul.009G087100 0.5kb downstream 0.5kb downstream 6076 true Chr09: 14087930-14094005 Phaseolus vulgaris
Phvul.009G087100 0.5kb downstream 0.5kb downstream 500 false Chr09: 14087930-14088429 Phaseolus vulgaris
Phvul.009G087100 1.0kb upstream 1.0kb upstream 6576 true Chr09: 14088430-14095005 Phaseolus vulgaris
Phvul.009G087100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14094006-14095005 Phaseolus vulgaris
Phvul.009G087100 1.0kb downstream 1.0kb downstream 6576 true Chr09: 14087430-14094005 Phaseolus vulgaris
Phvul.009G087100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14087430-14088429 Phaseolus vulgaris
Phvul.009G087100 2.0kb upstream 2.0kb upstream 7576 true Chr09: 14088430-14096005 Phaseolus vulgaris
Phvul.009G087100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14094006-14096005 Phaseolus vulgaris
Phvul.009G087100 2.0kb downstream 2.0kb downstream 7576 true Chr09: 14086430-14094005 Phaseolus vulgaris
Phvul.009G087100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14086430-14088429 Phaseolus vulgaris
Phvul.009G087100 5.0kb upstream 5.0kb upstream 10576 true Chr09: 14088430-14099005 Phaseolus vulgaris
Phvul.009G087100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14094006-14099005 Phaseolus vulgaris
Phvul.009G087100 5.0kb downstream 5.0kb downstream 10576 true Chr09: 14083430-14094005 Phaseolus vulgaris
Phvul.009G087100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14083430-14088429 Phaseolus vulgaris
Phvul.009G087100 10.0kb upstream 10.0kb upstream 15576 true Chr09: 14088430-14104005 Phaseolus vulgaris
Phvul.009G087100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14094006-14104005 Phaseolus vulgaris
Phvul.009G087100 10.0kb downstream 10.0kb downstream 15576 true Chr09: 14078430-14094005 Phaseolus vulgaris
Phvul.009G087100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14078430-14088429 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041349 5273 Angiosperm View MSA
122304466 5265 Fabidae View MSA
124060489 5270 Rosid View MSA
123745047 5271 Pentapetalae View MSA
122791134 5272 Eudicot View MSA
121350005 5274 Embryophyte View MSA
123428402 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.32738 0.0 6.52962   Low
cufflinks 12.0871 0.0 31.3108    
cufflinks 8.06061 0.0 20.8636    
cufflinks 3.64378 0.0 9.88391   Low
cufflinks 10.5008 0.0 27.1434    
cufflinks 10.9173 0.0 28.2399    
cufflinks 10.4723 0.0 27.0797    
cufflinks 16.835 0.0 44.2004   High
cufflinks 8.81361 0.0 22.7903    
cufflinks 17.5301 0.0 46.0398   High
cufflinks 10.2801 0.0 26.5731    

0 Strain