Gene : Phvul.009G071500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  735
Name:  ? Phvul.009G071500 Secondary Identifier:  ? PAC:37149059
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G071500 0.5kb upstream 0.5kb upstream 6646 true Chr09: 12355149-12361794 Phaseolus vulgaris
Phvul.009G071500 0.5kb upstream 0.5kb upstream 500 false Chr09: 12355149-12355648 Phaseolus vulgaris
Phvul.009G071500 0.5kb downstream 0.5kb downstream 6646 true Chr09: 12355649-12362294 Phaseolus vulgaris
Phvul.009G071500 0.5kb downstream 0.5kb downstream 500 false Chr09: 12361795-12362294 Phaseolus vulgaris
Phvul.009G071500 1.0kb upstream 1.0kb upstream 7146 true Chr09: 12354649-12361794 Phaseolus vulgaris
Phvul.009G071500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12354649-12355648 Phaseolus vulgaris
Phvul.009G071500 1.0kb downstream 1.0kb downstream 7146 true Chr09: 12355649-12362794 Phaseolus vulgaris
Phvul.009G071500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12361795-12362794 Phaseolus vulgaris
Phvul.009G071500 2.0kb upstream 2.0kb upstream 8146 true Chr09: 12353649-12361794 Phaseolus vulgaris
Phvul.009G071500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12353649-12355648 Phaseolus vulgaris
Phvul.009G071500 2.0kb downstream 2.0kb downstream 8146 true Chr09: 12355649-12363794 Phaseolus vulgaris
Phvul.009G071500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12361795-12363794 Phaseolus vulgaris
Phvul.009G071500 5.0kb upstream 5.0kb upstream 11146 true Chr09: 12350649-12361794 Phaseolus vulgaris
Phvul.009G071500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12350649-12355648 Phaseolus vulgaris
Phvul.009G071500 5.0kb downstream 5.0kb downstream 11146 true Chr09: 12355649-12366794 Phaseolus vulgaris
Phvul.009G071500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12361795-12366794 Phaseolus vulgaris
Phvul.009G071500 10.0kb upstream 10.0kb upstream 16146 true Chr09: 12345649-12361794 Phaseolus vulgaris
Phvul.009G071500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12345649-12355648 Phaseolus vulgaris
Phvul.009G071500 10.0kb downstream 10.0kb downstream 16146 true Chr09: 12355649-12371794 Phaseolus vulgaris
Phvul.009G071500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12361795-12371794 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310652 5265 Fabidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.4504 0.0 235.972 High High
cufflinks 23.8414 0.0 66.5255    
cufflinks 18.8704 0.0 53.346    
cufflinks 19.7305 0.0 55.9594    
cufflinks 14.7579 0.0 43.1303    
cufflinks 14.1063 0.0 41.1344    
cufflinks 19.6175 0.0 55.6298    
cufflinks 23.5113 0.0 65.5862    
cufflinks 20.9012 0.0 58.7763    
cufflinks 29.8777 0.0 83.0079    
cufflinks 13.8205 0.0 40.7698    

0 Strain