Gene : Phvul.006G176900 P. vulgaris v2.1
Defline:  (1 of 3) K02914 - large subunit ribosomal protein L34 (RP-L34, MRPL34, rpmH) Genomic Order:  1777
Name:  ? Phvul.006G176900 Secondary Identifier:  ? PAC:37174091
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G176900 0.5kb upstream 0.5kb upstream 2216 true Chr06: 27945703-27947918 Phaseolus vulgaris
Phvul.006G176900 0.5kb upstream 0.5kb upstream 500 false Chr06: 27947419-27947918 Phaseolus vulgaris
Phvul.006G176900 0.5kb downstream 0.5kb downstream 2216 true Chr06: 27945203-27947418 Phaseolus vulgaris
Phvul.006G176900 0.5kb downstream 0.5kb downstream 500 false Chr06: 27945203-27945702 Phaseolus vulgaris
Phvul.006G176900 1.0kb upstream 1.0kb upstream 2716 true Chr06: 27945703-27948418 Phaseolus vulgaris
Phvul.006G176900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27947419-27948418 Phaseolus vulgaris
Phvul.006G176900 1.0kb downstream 1.0kb downstream 2716 true Chr06: 27944703-27947418 Phaseolus vulgaris
Phvul.006G176900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27944703-27945702 Phaseolus vulgaris
Phvul.006G176900 2.0kb upstream 2.0kb upstream 3716 true Chr06: 27945703-27949418 Phaseolus vulgaris
Phvul.006G176900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27947419-27949418 Phaseolus vulgaris
Phvul.006G176900 2.0kb downstream 2.0kb downstream 3716 true Chr06: 27943703-27947418 Phaseolus vulgaris
Phvul.006G176900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27943703-27945702 Phaseolus vulgaris
Phvul.006G176900 5.0kb upstream 5.0kb upstream 6716 true Chr06: 27945703-27952418 Phaseolus vulgaris
Phvul.006G176900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27947419-27952418 Phaseolus vulgaris
Phvul.006G176900 5.0kb downstream 5.0kb downstream 6716 true Chr06: 27940703-27947418 Phaseolus vulgaris
Phvul.006G176900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27940703-27945702 Phaseolus vulgaris
Phvul.006G176900 10.0kb upstream 10.0kb upstream 11716 true Chr06: 27945703-27957418 Phaseolus vulgaris
Phvul.006G176900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27947419-27957418 Phaseolus vulgaris
Phvul.006G176900 10.0kb downstream 10.0kb downstream 11716 true Chr06: 27935703-27947418 Phaseolus vulgaris
Phvul.006G176900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27935703-27945702 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301993 5265 Fabidae View MSA
124063113 5270 Rosid View MSA
123739506 5271 Pentapetalae View MSA
122792806 5272 Eudicot View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.7966 0.0 144.293 High  
cufflinks 77.9051 0.0 202.156 High  
cufflinks 248.146 0.0 663.337 High High
cufflinks 59.0612 0.0 154.636 High  
cufflinks 53.4207 0.0 141.298 High  
cufflinks 202.743 0.0 534.608 High High
cufflinks 7.53633 0.0 24.1014   Low
cufflinks 13.3874 0.0 40.252    
cufflinks 8.50977 0.0 26.859   Low
cufflinks 31.0917 0.0 85.9702    
cufflinks 39.2281 0.0 105.972 High  

0 Strain