Gene : Phvul.009G073200 P. vulgaris v2.1
Defline:  (1 of 1) 2.3.1.43 - Phosphatidylcholine--sterol O-acyltransferase / Phospholipid--cholesterol acyltransferase Genomic Order:  754
Name:  ? Phvul.009G073200 Secondary Identifier:  ? PAC:37151230
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G073200 0.5kb upstream 0.5kb upstream 2410 true Chr09: 12535128-12537537 Phaseolus vulgaris
Phvul.009G073200 0.5kb upstream 0.5kb upstream 500 false Chr09: 12535128-12535627 Phaseolus vulgaris
Phvul.009G073200 0.5kb downstream 0.5kb downstream 2410 true Chr09: 12535628-12538037 Phaseolus vulgaris
Phvul.009G073200 0.5kb downstream 0.5kb downstream 500 false Chr09: 12537538-12538037 Phaseolus vulgaris
Phvul.009G073200 1.0kb upstream 1.0kb upstream 2910 true Chr09: 12534628-12537537 Phaseolus vulgaris
Phvul.009G073200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12534628-12535627 Phaseolus vulgaris
Phvul.009G073200 1.0kb downstream 1.0kb downstream 2910 true Chr09: 12535628-12538537 Phaseolus vulgaris
Phvul.009G073200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12537538-12538537 Phaseolus vulgaris
Phvul.009G073200 2.0kb upstream 2.0kb upstream 3910 true Chr09: 12533628-12537537 Phaseolus vulgaris
Phvul.009G073200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12533628-12535627 Phaseolus vulgaris
Phvul.009G073200 2.0kb downstream 2.0kb downstream 3910 true Chr09: 12535628-12539537 Phaseolus vulgaris
Phvul.009G073200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12537538-12539537 Phaseolus vulgaris
Phvul.009G073200 5.0kb upstream 5.0kb upstream 6910 true Chr09: 12530628-12537537 Phaseolus vulgaris
Phvul.009G073200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12530628-12535627 Phaseolus vulgaris
Phvul.009G073200 5.0kb downstream 5.0kb downstream 6910 true Chr09: 12535628-12542537 Phaseolus vulgaris
Phvul.009G073200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12537538-12542537 Phaseolus vulgaris
Phvul.009G073200 10.0kb upstream 10.0kb upstream 11910 true Chr09: 12525628-12537537 Phaseolus vulgaris
Phvul.009G073200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12525628-12535627 Phaseolus vulgaris
Phvul.009G073200 10.0kb downstream 10.0kb downstream 11910 true Chr09: 12535628-12547537 Phaseolus vulgaris
Phvul.009G073200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12537538-12547537 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299956 5265 Fabidae View MSA
124050426 5270 Rosid View MSA
123738135 5271 Pentapetalae View MSA
122785925 5272 Eudicot View MSA
122051550 5273 Angiosperm View MSA
121347013 5274 Embryophyte View MSA
123427608 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29188 0.0 17.7316    
cufflinks 5.69702 0.0 16.2445    
cufflinks 12.2494 0.0 32.5877   High
cufflinks 5.23934 0.0 15.1275    
cufflinks 4.99419 0.0 14.4707    
cufflinks 12.85 0.0 34.1098   High
cufflinks 0.857947 0.0 3.02455   Low
cufflinks 1.39858 0.0 4.65589   Low
cufflinks 1.2019 0.0 4.09794   Low
cufflinks 7.59005 0.0 21.0727    
cufflinks 5.16371 0.0 14.9291    

0 Strain