Gene : Phvul.006G180600 P. vulgaris v2.1
Defline:  (1 of 2) PF05129 - Transcription elongation factor Elf1 like (Elf1) Genomic Order:  1819
Name:  ? Phvul.006G180600 Secondary Identifier:  ? PAC:37171519
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G180600 0.5kb upstream 0.5kb upstream 2870 true Chr06: 28233137-28236006 Phaseolus vulgaris
Phvul.006G180600 0.5kb upstream 0.5kb upstream 500 false Chr06: 28233137-28233636 Phaseolus vulgaris
Phvul.006G180600 0.5kb downstream 0.5kb downstream 2870 true Chr06: 28233637-28236506 Phaseolus vulgaris
Phvul.006G180600 0.5kb downstream 0.5kb downstream 500 false Chr06: 28236007-28236506 Phaseolus vulgaris
Phvul.006G180600 1.0kb upstream 1.0kb upstream 3370 true Chr06: 28232637-28236006 Phaseolus vulgaris
Phvul.006G180600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28232637-28233636 Phaseolus vulgaris
Phvul.006G180600 1.0kb downstream 1.0kb downstream 3370 true Chr06: 28233637-28237006 Phaseolus vulgaris
Phvul.006G180600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28236007-28237006 Phaseolus vulgaris
Phvul.006G180600 2.0kb upstream 2.0kb upstream 4370 true Chr06: 28231637-28236006 Phaseolus vulgaris
Phvul.006G180600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28231637-28233636 Phaseolus vulgaris
Phvul.006G180600 2.0kb downstream 2.0kb downstream 4370 true Chr06: 28233637-28238006 Phaseolus vulgaris
Phvul.006G180600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28236007-28238006 Phaseolus vulgaris
Phvul.006G180600 5.0kb upstream 5.0kb upstream 7370 true Chr06: 28228637-28236006 Phaseolus vulgaris
Phvul.006G180600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28228637-28233636 Phaseolus vulgaris
Phvul.006G180600 5.0kb downstream 5.0kb downstream 7370 true Chr06: 28233637-28241006 Phaseolus vulgaris
Phvul.006G180600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28236007-28241006 Phaseolus vulgaris
Phvul.006G180600 10.0kb upstream 10.0kb upstream 12370 true Chr06: 28223637-28236006 Phaseolus vulgaris
Phvul.006G180600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28223637-28233636 Phaseolus vulgaris
Phvul.006G180600 10.0kb downstream 10.0kb downstream 12370 true Chr06: 28233637-28246006 Phaseolus vulgaris
Phvul.006G180600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28236007-28246006 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310094 5265 Fabidae View MSA
124072024 5270 Rosid View MSA
123744235 5271 Pentapetalae View MSA
122794873 5272 Eudicot View MSA
122050937 5273 Angiosperm View MSA
121347501 5274 Embryophyte View MSA
123425183 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 478.98 0.0 1916.9 High High
cufflinks 147.951 0.0 438.722 High  
cufflinks 95.1277 0.0 318.267 High  
cufflinks 248.096 0.0 940.671 High High
cufflinks 116.934 0.0 440.338 High  
cufflinks 61.9669 0.0 205.912 High Low
cufflinks 96.7406 0.0 270.577 High  
cufflinks 125.538 0.0 426.048 High  
cufflinks 98.6683 0.0 277.771 High  
cufflinks 142.739 0.0 540.63 High  
cufflinks 165.299 0.0 588.193 High  

0 Strain