Gene : Phvul.006G167700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  1674
Name:  ? Phvul.006G167700 Secondary Identifier:  ? PAC:37172316
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G167700 0.5kb upstream 0.5kb upstream 5157 true Chr06: 27041059-27046215 Phaseolus vulgaris
Phvul.006G167700 0.5kb upstream 0.5kb upstream 500 false Chr06: 27045716-27046215 Phaseolus vulgaris
Phvul.006G167700 0.5kb downstream 0.5kb downstream 5157 true Chr06: 27040559-27045715 Phaseolus vulgaris
Phvul.006G167700 0.5kb downstream 0.5kb downstream 500 false Chr06: 27040559-27041058 Phaseolus vulgaris
Phvul.006G167700 1.0kb upstream 1.0kb upstream 5657 true Chr06: 27041059-27046715 Phaseolus vulgaris
Phvul.006G167700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27045716-27046715 Phaseolus vulgaris
Phvul.006G167700 1.0kb downstream 1.0kb downstream 5657 true Chr06: 27040059-27045715 Phaseolus vulgaris
Phvul.006G167700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27040059-27041058 Phaseolus vulgaris
Phvul.006G167700 2.0kb upstream 2.0kb upstream 6657 true Chr06: 27041059-27047715 Phaseolus vulgaris
Phvul.006G167700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27045716-27047715 Phaseolus vulgaris
Phvul.006G167700 2.0kb downstream 2.0kb downstream 6657 true Chr06: 27039059-27045715 Phaseolus vulgaris
Phvul.006G167700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27039059-27041058 Phaseolus vulgaris
Phvul.006G167700 5.0kb upstream 5.0kb upstream 9657 true Chr06: 27041059-27050715 Phaseolus vulgaris
Phvul.006G167700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27045716-27050715 Phaseolus vulgaris
Phvul.006G167700 5.0kb downstream 5.0kb downstream 9657 true Chr06: 27036059-27045715 Phaseolus vulgaris
Phvul.006G167700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27036059-27041058 Phaseolus vulgaris
Phvul.006G167700 10.0kb upstream 10.0kb upstream 14657 true Chr06: 27041059-27055715 Phaseolus vulgaris
Phvul.006G167700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27045716-27055715 Phaseolus vulgaris
Phvul.006G167700 10.0kb downstream 10.0kb downstream 14657 true Chr06: 27031059-27045715 Phaseolus vulgaris
Phvul.006G167700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27031059-27041058 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301398 5265 Fabidae View MSA
124065174 5270 Rosid View MSA
123736391 5271 Pentapetalae View MSA
122785693 5272 Eudicot View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.2002 0.0 98.3914 High  
cufflinks 36.3992 0.0 96.0028 High  
cufflinks 234.785 0.0 800.903 High High
cufflinks 23.3079 0.0 60.3272    
cufflinks 121.952 0.0 364.244 High High
cufflinks 61.7673 0.0 170.437 High  
cufflinks 15.3911 0.0 39.8686    
cufflinks 7.21103 0.0 19.41   Low
cufflinks 18.7707 0.0 48.5232    
cufflinks 37.2839 0.0 98.5103 High  
cufflinks 92.4745 0.0 265.692 High  

0 Strain