Gene : Phvul.009G057700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12064//PTHR12064:SF35 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  583
Name:  ? Phvul.009G057700 Secondary Identifier:  ? PAC:37148579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G057700 0.5kb upstream 0.5kb upstream 7451 true Chr09: 10803272-10810722 Phaseolus vulgaris
Phvul.009G057700 0.5kb upstream 0.5kb upstream 500 false Chr09: 10810223-10810722 Phaseolus vulgaris
Phvul.009G057700 0.5kb downstream 0.5kb downstream 7451 true Chr09: 10802772-10810222 Phaseolus vulgaris
Phvul.009G057700 0.5kb downstream 0.5kb downstream 500 false Chr09: 10802772-10803271 Phaseolus vulgaris
Phvul.009G057700 1.0kb upstream 1.0kb upstream 7951 true Chr09: 10803272-10811222 Phaseolus vulgaris
Phvul.009G057700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10810223-10811222 Phaseolus vulgaris
Phvul.009G057700 1.0kb downstream 1.0kb downstream 7951 true Chr09: 10802272-10810222 Phaseolus vulgaris
Phvul.009G057700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10802272-10803271 Phaseolus vulgaris
Phvul.009G057700 2.0kb upstream 2.0kb upstream 8951 true Chr09: 10803272-10812222 Phaseolus vulgaris
Phvul.009G057700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10810223-10812222 Phaseolus vulgaris
Phvul.009G057700 2.0kb downstream 2.0kb downstream 8951 true Chr09: 10801272-10810222 Phaseolus vulgaris
Phvul.009G057700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10801272-10803271 Phaseolus vulgaris
Phvul.009G057700 5.0kb upstream 5.0kb upstream 11951 true Chr09: 10803272-10815222 Phaseolus vulgaris
Phvul.009G057700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10810223-10815222 Phaseolus vulgaris
Phvul.009G057700 5.0kb downstream 5.0kb downstream 11951 true Chr09: 10798272-10810222 Phaseolus vulgaris
Phvul.009G057700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10798272-10803271 Phaseolus vulgaris
Phvul.009G057700 10.0kb upstream 10.0kb upstream 16951 true Chr09: 10803272-10820222 Phaseolus vulgaris
Phvul.009G057700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10810223-10820222 Phaseolus vulgaris
Phvul.009G057700 10.0kb downstream 10.0kb downstream 16951 true Chr09: 10793272-10810222 Phaseolus vulgaris
Phvul.009G057700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10793272-10803271 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308235 5265 Fabidae View MSA
124067520 5270 Rosid View MSA
123745826 5271 Pentapetalae View MSA
122787800 5272 Eudicot View MSA
122046250 5273 Angiosperm View MSA
121348237 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.87866 0.0 26.4761    
cufflinks 5.50052 0.0 15.5307   Low
cufflinks 11.8238 0.0 31.2581    
cufflinks 14.4247 0.0 37.8881    
cufflinks 4.16484 0.0 12.1816   Low
cufflinks 10.3973 0.0 27.7684    
cufflinks 12.8297 0.0 33.7825    
cufflinks 6.9754 0.0 19.1756    
cufflinks 18.6642 0.0 48.4175   High
cufflinks 9.83999 0.0 26.4306    
cufflinks 6.36101 0.0 17.8137    

0 Strain