Gene : Phvul.009G060200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13878:SF60 - CYTOKININ DEHYDROGENASE 5 Genomic Order:  608
Name:  ? Phvul.009G060200 Secondary Identifier:  ? PAC:37150987
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G060200 0.5kb upstream 0.5kb upstream 7093 true Chr09: 11010110-11017202 Phaseolus vulgaris
Phvul.009G060200 0.5kb upstream 0.5kb upstream 500 false Chr09: 11010110-11010609 Phaseolus vulgaris
Phvul.009G060200 0.5kb downstream 0.5kb downstream 7093 true Chr09: 11010610-11017702 Phaseolus vulgaris
Phvul.009G060200 0.5kb downstream 0.5kb downstream 500 false Chr09: 11017203-11017702 Phaseolus vulgaris
Phvul.009G060200 1.0kb upstream 1.0kb upstream 7593 true Chr09: 11009610-11017202 Phaseolus vulgaris
Phvul.009G060200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11009610-11010609 Phaseolus vulgaris
Phvul.009G060200 1.0kb downstream 1.0kb downstream 7593 true Chr09: 11010610-11018202 Phaseolus vulgaris
Phvul.009G060200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11017203-11018202 Phaseolus vulgaris
Phvul.009G060200 2.0kb upstream 2.0kb upstream 8593 true Chr09: 11008610-11017202 Phaseolus vulgaris
Phvul.009G060200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11008610-11010609 Phaseolus vulgaris
Phvul.009G060200 2.0kb downstream 2.0kb downstream 8593 true Chr09: 11010610-11019202 Phaseolus vulgaris
Phvul.009G060200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11017203-11019202 Phaseolus vulgaris
Phvul.009G060200 5.0kb upstream 5.0kb upstream 11593 true Chr09: 11005610-11017202 Phaseolus vulgaris
Phvul.009G060200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11005610-11010609 Phaseolus vulgaris
Phvul.009G060200 5.0kb downstream 5.0kb downstream 11593 true Chr09: 11010610-11022202 Phaseolus vulgaris
Phvul.009G060200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11017203-11022202 Phaseolus vulgaris
Phvul.009G060200 10.0kb upstream 10.0kb upstream 16593 true Chr09: 11000610-11017202 Phaseolus vulgaris
Phvul.009G060200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11000610-11010609 Phaseolus vulgaris
Phvul.009G060200 10.0kb downstream 10.0kb downstream 16593 true Chr09: 11010610-11027202 Phaseolus vulgaris
Phvul.009G060200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11017203-11027202 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304076 5265 Fabidae View MSA
124065162 5270 Rosid View MSA
123739641 5271 Pentapetalae View MSA
122791542 5272 Eudicot View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0758529 0.0 0.311706 Low Low
cufflinks 0.417662 0.0 1.83953 Low  
cufflinks 1.55344 0.0 5.04563    
cufflinks 0.106543 0.0 0.428502 Low Low
cufflinks 4.35292 0.0 16.1435    
cufflinks 3.42503 0.0 13.4474    
cufflinks 6.53898 0.0 22.422    
cufflinks 47.001 0.0 171.693 High High
cufflinks 0.785792 0.0 3.86248    
cufflinks 0.782292 0.0 3.00512    
cufflinks 1.58484 0.0 6.60487    

0 Strain