Gene : Phvul.009G062100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12383:SF15 - THYLAKOIDAL PROCESSING PEPTIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  632
Name:  ? Phvul.009G062100 Secondary Identifier:  ? PAC:37151832
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G062100 0.5kb upstream 0.5kb upstream 3056 true Chr09: 11225528-11228583 Phaseolus vulgaris
Phvul.009G062100 0.5kb upstream 0.5kb upstream 500 false Chr09: 11225528-11226027 Phaseolus vulgaris
Phvul.009G062100 0.5kb downstream 0.5kb downstream 3056 true Chr09: 11226028-11229083 Phaseolus vulgaris
Phvul.009G062100 0.5kb downstream 0.5kb downstream 500 false Chr09: 11228584-11229083 Phaseolus vulgaris
Phvul.009G062100 1.0kb upstream 1.0kb upstream 3556 true Chr09: 11225028-11228583 Phaseolus vulgaris
Phvul.009G062100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11225028-11226027 Phaseolus vulgaris
Phvul.009G062100 1.0kb downstream 1.0kb downstream 3556 true Chr09: 11226028-11229583 Phaseolus vulgaris
Phvul.009G062100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11228584-11229583 Phaseolus vulgaris
Phvul.009G062100 2.0kb upstream 2.0kb upstream 4556 true Chr09: 11224028-11228583 Phaseolus vulgaris
Phvul.009G062100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11224028-11226027 Phaseolus vulgaris
Phvul.009G062100 2.0kb downstream 2.0kb downstream 4556 true Chr09: 11226028-11230583 Phaseolus vulgaris
Phvul.009G062100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11228584-11230583 Phaseolus vulgaris
Phvul.009G062100 5.0kb upstream 5.0kb upstream 7556 true Chr09: 11221028-11228583 Phaseolus vulgaris
Phvul.009G062100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11221028-11226027 Phaseolus vulgaris
Phvul.009G062100 5.0kb downstream 5.0kb downstream 7556 true Chr09: 11226028-11233583 Phaseolus vulgaris
Phvul.009G062100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11228584-11233583 Phaseolus vulgaris
Phvul.009G062100 10.0kb upstream 10.0kb upstream 12556 true Chr09: 11216028-11228583 Phaseolus vulgaris
Phvul.009G062100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11216028-11226027 Phaseolus vulgaris
Phvul.009G062100 10.0kb downstream 10.0kb downstream 12556 true Chr09: 11226028-11238583 Phaseolus vulgaris
Phvul.009G062100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11228584-11238583 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301508 5265 Fabidae View MSA
124066317 5270 Rosid View MSA
123747244 5271 Pentapetalae View MSA
122789106 5272 Eudicot View MSA
122046589 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 133.023 0.0 384.961 High  
cufflinks 61.7918 0.0 164.294 High Low
cufflinks 77.8773 0.0 211.115 High  
cufflinks 119.663 0.0 340.499 High  
cufflinks 90.16 0.0 248.708 High  
cufflinks 76.9636 0.0 208.228 High  
cufflinks 116.889 0.0 331.108 High  
cufflinks 68.5699 0.0 184.232 High  
cufflinks 187.386 0.0 560.531 High High
cufflinks 47.2031 0.0 123.731 High Low
cufflinks 128.693 0.0 368.773 High  

0 Strain