Gene : Phvul.006G169600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11945:SF187 - FLORAL HOMEOTIC PROTEIN AGAMOUS Genomic Order:  1703
Name:  ? Phvul.006G169600 Secondary Identifier:  ? PAC:37171576
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G169600 0.5kb upstream 0.5kb upstream 8339 true Chr06: 27307945-27316283 Phaseolus vulgaris
Phvul.006G169600 0.5kb upstream 0.5kb upstream 500 false Chr06: 27315784-27316283 Phaseolus vulgaris
Phvul.006G169600 0.5kb downstream 0.5kb downstream 8339 true Chr06: 27307445-27315783 Phaseolus vulgaris
Phvul.006G169600 0.5kb downstream 0.5kb downstream 500 false Chr06: 27307445-27307944 Phaseolus vulgaris
Phvul.006G169600 1.0kb upstream 1.0kb upstream 8839 true Chr06: 27307945-27316783 Phaseolus vulgaris
Phvul.006G169600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27315784-27316783 Phaseolus vulgaris
Phvul.006G169600 1.0kb downstream 1.0kb downstream 8839 true Chr06: 27306945-27315783 Phaseolus vulgaris
Phvul.006G169600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27306945-27307944 Phaseolus vulgaris
Phvul.006G169600 2.0kb upstream 2.0kb upstream 9839 true Chr06: 27307945-27317783 Phaseolus vulgaris
Phvul.006G169600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27315784-27317783 Phaseolus vulgaris
Phvul.006G169600 2.0kb downstream 2.0kb downstream 9839 true Chr06: 27305945-27315783 Phaseolus vulgaris
Phvul.006G169600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27305945-27307944 Phaseolus vulgaris
Phvul.006G169600 5.0kb upstream 5.0kb upstream 12839 true Chr06: 27307945-27320783 Phaseolus vulgaris
Phvul.006G169600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27315784-27320783 Phaseolus vulgaris
Phvul.006G169600 5.0kb downstream 5.0kb downstream 12839 true Chr06: 27302945-27315783 Phaseolus vulgaris
Phvul.006G169600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27302945-27307944 Phaseolus vulgaris
Phvul.006G169600 10.0kb upstream 10.0kb upstream 17839 true Chr06: 27307945-27325783 Phaseolus vulgaris
Phvul.006G169600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27315784-27325783 Phaseolus vulgaris
Phvul.006G169600 10.0kb downstream 10.0kb downstream 17839 true Chr06: 27297945-27315783 Phaseolus vulgaris
Phvul.006G169600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27297945-27307944 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311895 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.5732 0.0 94.8745 High  
cufflinks 74.5492 0.0 194.56 High High
cufflinks 0.40539 0.0 1.58983 Low  
cufflinks 42.138 0.0 109.072 High  
cufflinks 0.125952 0.0 0.551655 Low  
cufflinks 0.651673 0.0 2.46432    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.107169 0.0 0.46926 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 92.9107 0.0 244.793 High High
cufflinks 0.0354965 0.0 0.1761 Low Low

0 Strain