Gene : Phvul.006G170700 P. vulgaris v2.1
Defline:  (1 of 27) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  1714
Name:  ? Phvul.006G170700 Secondary Identifier:  ? PAC:37171863
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G170700 0.5kb upstream 0.5kb upstream 5153 true Chr06: 27398890-27404042 Phaseolus vulgaris
Phvul.006G170700 0.5kb upstream 0.5kb upstream 500 false Chr06: 27403543-27404042 Phaseolus vulgaris
Phvul.006G170700 0.5kb downstream 0.5kb downstream 5153 true Chr06: 27398390-27403542 Phaseolus vulgaris
Phvul.006G170700 0.5kb downstream 0.5kb downstream 500 false Chr06: 27398390-27398889 Phaseolus vulgaris
Phvul.006G170700 1.0kb upstream 1.0kb upstream 5653 true Chr06: 27398890-27404542 Phaseolus vulgaris
Phvul.006G170700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27403543-27404542 Phaseolus vulgaris
Phvul.006G170700 1.0kb downstream 1.0kb downstream 5653 true Chr06: 27397890-27403542 Phaseolus vulgaris
Phvul.006G170700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27397890-27398889 Phaseolus vulgaris
Phvul.006G170700 2.0kb upstream 2.0kb upstream 6653 true Chr06: 27398890-27405542 Phaseolus vulgaris
Phvul.006G170700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27403543-27405542 Phaseolus vulgaris
Phvul.006G170700 2.0kb downstream 2.0kb downstream 6653 true Chr06: 27396890-27403542 Phaseolus vulgaris
Phvul.006G170700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27396890-27398889 Phaseolus vulgaris
Phvul.006G170700 5.0kb upstream 5.0kb upstream 9653 true Chr06: 27398890-27408542 Phaseolus vulgaris
Phvul.006G170700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27403543-27408542 Phaseolus vulgaris
Phvul.006G170700 5.0kb downstream 5.0kb downstream 9653 true Chr06: 27393890-27403542 Phaseolus vulgaris
Phvul.006G170700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27393890-27398889 Phaseolus vulgaris
Phvul.006G170700 10.0kb upstream 10.0kb upstream 14653 true Chr06: 27398890-27413542 Phaseolus vulgaris
Phvul.006G170700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27403543-27413542 Phaseolus vulgaris
Phvul.006G170700 10.0kb downstream 10.0kb downstream 14653 true Chr06: 27388890-27403542 Phaseolus vulgaris
Phvul.006G170700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27388890-27398889 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312204 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0123879 0.0 0.0613942 Low Low
cufflinks 0.0114471 0.0 0.0571738 Low Low
cufflinks 0.216096 0.0 0.824113 Low High
cufflinks 0.0486517 0.0 0.210976 Low  
cufflinks 0.0677468 0.0 0.285719 Low  
cufflinks 0.062521 0.0 0.262792 Low  
cufflinks 0.0395449 0.0 0.172993 Low  
cufflinks 0.0476816 0.0 0.204395 Low  
cufflinks 0.113489 0.0 0.453263 Low High
cufflinks 0.0330447 0.0 0.14818 Low  
cufflinks 0.0127206 0.0 0.0631074 Low Low

0 Strain