Gene : Phvul.009G052900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10666:SF135 - F15I1.6 PROTEIN-RELATED Genomic Order:  534
Name:  ? Phvul.009G052900 Secondary Identifier:  ? PAC:37149005
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6351 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6352 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G052900 0.5kb upstream 0.5kb upstream 4586 true Chr09: 10183999-10188584 Phaseolus vulgaris
Phvul.009G052900 0.5kb upstream 0.5kb upstream 500 false Chr09: 10183999-10184498 Phaseolus vulgaris
Phvul.009G052900 0.5kb downstream 0.5kb downstream 4586 true Chr09: 10184499-10189084 Phaseolus vulgaris
Phvul.009G052900 0.5kb downstream 0.5kb downstream 500 false Chr09: 10188585-10189084 Phaseolus vulgaris
Phvul.009G052900 1.0kb upstream 1.0kb upstream 5086 true Chr09: 10183499-10188584 Phaseolus vulgaris
Phvul.009G052900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10183499-10184498 Phaseolus vulgaris
Phvul.009G052900 1.0kb downstream 1.0kb downstream 5086 true Chr09: 10184499-10189584 Phaseolus vulgaris
Phvul.009G052900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10188585-10189584 Phaseolus vulgaris
Phvul.009G052900 2.0kb upstream 2.0kb upstream 6086 true Chr09: 10182499-10188584 Phaseolus vulgaris
Phvul.009G052900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10182499-10184498 Phaseolus vulgaris
Phvul.009G052900 2.0kb downstream 2.0kb downstream 6086 true Chr09: 10184499-10190584 Phaseolus vulgaris
Phvul.009G052900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10188585-10190584 Phaseolus vulgaris
Phvul.009G052900 5.0kb upstream 5.0kb upstream 9086 true Chr09: 10179499-10188584 Phaseolus vulgaris
Phvul.009G052900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10179499-10184498 Phaseolus vulgaris
Phvul.009G052900 5.0kb downstream 5.0kb downstream 9086 true Chr09: 10184499-10193584 Phaseolus vulgaris
Phvul.009G052900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10188585-10193584 Phaseolus vulgaris
Phvul.009G052900 10.0kb upstream 10.0kb upstream 14086 true Chr09: 10174499-10188584 Phaseolus vulgaris
Phvul.009G052900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10174499-10184498 Phaseolus vulgaris
Phvul.009G052900 10.0kb downstream 10.0kb downstream 14086 true Chr09: 10184499-10198584 Phaseolus vulgaris
Phvul.009G052900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10188585-10198584 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67248 0.0 15.5162   High
cufflinks 3.47182 0.0 9.937    
cufflinks 2.65869 0.0 7.79952    
cufflinks 3.89344 0.0 11.135    
cufflinks 2.37462 0.0 7.16598    
cufflinks 4.0105 0.0 11.3006    
cufflinks 1.9135 0.0 5.86114    
cufflinks 1.7436 0.0 5.36575   Low
cufflinks 1.54146 0.0 4.85318   Low
cufflinks 3.0914 0.0 8.9708    
cufflinks 2.62221 0.0 7.79633    

0 Strain