Gene : Phvul.009G052200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Genomic Order:  527
Name:  ? Phvul.009G052200 Secondary Identifier:  ? PAC:37150586
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G052200 0.5kb upstream 0.5kb upstream 4629 true Chr09: 10085488-10090116 Phaseolus vulgaris
Phvul.009G052200 0.5kb upstream 0.5kb upstream 500 false Chr09: 10089617-10090116 Phaseolus vulgaris
Phvul.009G052200 0.5kb downstream 0.5kb downstream 4629 true Chr09: 10084988-10089616 Phaseolus vulgaris
Phvul.009G052200 0.5kb downstream 0.5kb downstream 500 false Chr09: 10084988-10085487 Phaseolus vulgaris
Phvul.009G052200 1.0kb upstream 1.0kb upstream 5129 true Chr09: 10085488-10090616 Phaseolus vulgaris
Phvul.009G052200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10089617-10090616 Phaseolus vulgaris
Phvul.009G052200 1.0kb downstream 1.0kb downstream 5129 true Chr09: 10084488-10089616 Phaseolus vulgaris
Phvul.009G052200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10084488-10085487 Phaseolus vulgaris
Phvul.009G052200 2.0kb upstream 2.0kb upstream 6129 true Chr09: 10085488-10091616 Phaseolus vulgaris
Phvul.009G052200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10089617-10091616 Phaseolus vulgaris
Phvul.009G052200 2.0kb downstream 2.0kb downstream 6129 true Chr09: 10083488-10089616 Phaseolus vulgaris
Phvul.009G052200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10083488-10085487 Phaseolus vulgaris
Phvul.009G052200 5.0kb upstream 5.0kb upstream 9129 true Chr09: 10085488-10094616 Phaseolus vulgaris
Phvul.009G052200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10089617-10094616 Phaseolus vulgaris
Phvul.009G052200 5.0kb downstream 5.0kb downstream 9129 true Chr09: 10080488-10089616 Phaseolus vulgaris
Phvul.009G052200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10080488-10085487 Phaseolus vulgaris
Phvul.009G052200 10.0kb upstream 10.0kb upstream 14129 true Chr09: 10085488-10099616 Phaseolus vulgaris
Phvul.009G052200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10089617-10099616 Phaseolus vulgaris
Phvul.009G052200 10.0kb downstream 10.0kb downstream 14129 true Chr09: 10075488-10089616 Phaseolus vulgaris
Phvul.009G052200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10075488-10085487 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311115 5265 Fabidae View MSA
124061154 5270 Rosid View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28775 0.0 5.85503   Low
cufflinks 1.70917 0.0 7.33987   Low
cufflinks 35.5691 0.0 118.023   High
cufflinks 15.9578 0.0 52.5243    
cufflinks 9.25347 0.0 31.0763    
cufflinks 54.1789 0.0 194.274 High High
cufflinks 6.7376 0.0 20.4423    
cufflinks 9.56122 0.0 31.6358    
cufflinks 2.7544 0.0 10.0445    
cufflinks 2.45407 0.0 9.51425    
cufflinks 20.8093 0.0 66.1753    

0 Strain