Gene : Phvul.009G054400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10788//PTHR10788:SF39 - TREHALOSE-6-PHOSPHATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  550
Name:  ? Phvul.009G054400 Secondary Identifier:  ? PAC:37150250
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G054400 0.5kb upstream 0.5kb upstream 9103 true Chr09: 10411700-10420802 Phaseolus vulgaris
Phvul.009G054400 0.5kb upstream 0.5kb upstream 500 false Chr09: 10420303-10420802 Phaseolus vulgaris
Phvul.009G054400 0.5kb downstream 0.5kb downstream 9103 true Chr09: 10411200-10420302 Phaseolus vulgaris
Phvul.009G054400 0.5kb downstream 0.5kb downstream 500 false Chr09: 10411200-10411699 Phaseolus vulgaris
Phvul.009G054400 1.0kb upstream 1.0kb upstream 9603 true Chr09: 10411700-10421302 Phaseolus vulgaris
Phvul.009G054400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10420303-10421302 Phaseolus vulgaris
Phvul.009G054400 1.0kb downstream 1.0kb downstream 9603 true Chr09: 10410700-10420302 Phaseolus vulgaris
Phvul.009G054400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10410700-10411699 Phaseolus vulgaris
Phvul.009G054400 2.0kb upstream 2.0kb upstream 10603 true Chr09: 10411700-10422302 Phaseolus vulgaris
Phvul.009G054400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10420303-10422302 Phaseolus vulgaris
Phvul.009G054400 2.0kb downstream 2.0kb downstream 10603 true Chr09: 10409700-10420302 Phaseolus vulgaris
Phvul.009G054400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10409700-10411699 Phaseolus vulgaris
Phvul.009G054400 5.0kb upstream 5.0kb upstream 13603 true Chr09: 10411700-10425302 Phaseolus vulgaris
Phvul.009G054400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10420303-10425302 Phaseolus vulgaris
Phvul.009G054400 5.0kb downstream 5.0kb downstream 13603 true Chr09: 10406700-10420302 Phaseolus vulgaris
Phvul.009G054400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10406700-10411699 Phaseolus vulgaris
Phvul.009G054400 10.0kb upstream 10.0kb upstream 18603 true Chr09: 10411700-10430302 Phaseolus vulgaris
Phvul.009G054400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10420303-10430302 Phaseolus vulgaris
Phvul.009G054400 10.0kb downstream 10.0kb downstream 18603 true Chr09: 10401700-10420302 Phaseolus vulgaris
Phvul.009G054400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10401700-10411699 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303383 5265 Fabidae View MSA
124071032 5270 Rosid View MSA
123748006 5271 Pentapetalae View MSA
122793919 5272 Eudicot View MSA
122048868 5273 Angiosperm View MSA
121311146 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00302 0.0 3.56502    
cufflinks 0.0741153 0.0 0.32985 Low Low
cufflinks 0.696786 0.0 2.55538    
cufflinks 2.19238 0.0 7.23376   High
cufflinks 0.47893 0.0 1.83387 Low  
cufflinks 0.937846 0.0 3.35925    
cufflinks 0.266728 0.0 1.06179 Low  
cufflinks 0.203959 0.0 0.824248 Low  
cufflinks 0.194905 0.0 0.796391 Low  
cufflinks 0.0278747 0.0 0.13759 Low Low
cufflinks 0.113803 0.0 0.489775 Low  

0 Strain