Gene : Phvul.009G053700 P. vulgaris v2.1
Defline:  (1 of 1) K12827 - splicing factor 3A subunit 3 (SF3A3, SAP61, PRP9) Genomic Order:  542
Name:  ? Phvul.009G053700 Secondary Identifier:  ? PAC:37150832
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G053700 0.5kb upstream 0.5kb upstream 8743 true Chr09: 10328318-10337060 Phaseolus vulgaris
Phvul.009G053700 0.5kb upstream 0.5kb upstream 500 false Chr09: 10336561-10337060 Phaseolus vulgaris
Phvul.009G053700 0.5kb downstream 0.5kb downstream 8743 true Chr09: 10327818-10336560 Phaseolus vulgaris
Phvul.009G053700 0.5kb downstream 0.5kb downstream 500 false Chr09: 10327818-10328317 Phaseolus vulgaris
Phvul.009G053700 1.0kb upstream 1.0kb upstream 9243 true Chr09: 10328318-10337560 Phaseolus vulgaris
Phvul.009G053700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10336561-10337560 Phaseolus vulgaris
Phvul.009G053700 1.0kb downstream 1.0kb downstream 9243 true Chr09: 10327318-10336560 Phaseolus vulgaris
Phvul.009G053700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10327318-10328317 Phaseolus vulgaris
Phvul.009G053700 2.0kb upstream 2.0kb upstream 10243 true Chr09: 10328318-10338560 Phaseolus vulgaris
Phvul.009G053700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10336561-10338560 Phaseolus vulgaris
Phvul.009G053700 2.0kb downstream 2.0kb downstream 10243 true Chr09: 10326318-10336560 Phaseolus vulgaris
Phvul.009G053700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10326318-10328317 Phaseolus vulgaris
Phvul.009G053700 5.0kb upstream 5.0kb upstream 13243 true Chr09: 10328318-10341560 Phaseolus vulgaris
Phvul.009G053700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10336561-10341560 Phaseolus vulgaris
Phvul.009G053700 5.0kb downstream 5.0kb downstream 13243 true Chr09: 10323318-10336560 Phaseolus vulgaris
Phvul.009G053700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10323318-10328317 Phaseolus vulgaris
Phvul.009G053700 10.0kb upstream 10.0kb upstream 18243 true Chr09: 10328318-10346560 Phaseolus vulgaris
Phvul.009G053700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10336561-10346560 Phaseolus vulgaris
Phvul.009G053700 10.0kb downstream 10.0kb downstream 18243 true Chr09: 10318318-10336560 Phaseolus vulgaris
Phvul.009G053700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10318318-10328317 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306604 5265 Fabidae View MSA
124061347 5270 Rosid View MSA
123747659 5271 Pentapetalae View MSA
122793662 5272 Eudicot View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9172 0.0 31.0901   Low
cufflinks 20.8181 0.0 53.842    
cufflinks 17.9967 0.0 46.5191    
cufflinks 11.6604 0.0 30.5723   Low
cufflinks 17.3284 0.0 44.8537    
cufflinks 18.402 0.0 47.5658    
cufflinks 23.1452 0.0 60.0003    
cufflinks 22.8845 0.0 59.3534    
cufflinks 24.7707 0.0 64.3153   High
cufflinks 19.3114 0.0 49.9165    
cufflinks 20.9526 0.0 54.171    

0 Strain