Gene : Phvul.009G053900 P. vulgaris v2.1
Defline:  (1 of 2) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  543
Name:  ? Phvul.009G053900 Secondary Identifier:  ? PAC:37150765
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUGLNSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3282 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6963 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G053900 0.5kb upstream 0.5kb upstream 12628 true Chr09: 10351430-10364057 Phaseolus vulgaris
Phvul.009G053900 0.5kb upstream 0.5kb upstream 500 false Chr09: 10351430-10351929 Phaseolus vulgaris
Phvul.009G053900 0.5kb downstream 0.5kb downstream 12628 true Chr09: 10351930-10364557 Phaseolus vulgaris
Phvul.009G053900 0.5kb downstream 0.5kb downstream 500 false Chr09: 10364058-10364557 Phaseolus vulgaris
Phvul.009G053900 1.0kb upstream 1.0kb upstream 13128 true Chr09: 10350930-10364057 Phaseolus vulgaris
Phvul.009G053900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10350930-10351929 Phaseolus vulgaris
Phvul.009G053900 1.0kb downstream 1.0kb downstream 13128 true Chr09: 10351930-10365057 Phaseolus vulgaris
Phvul.009G053900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10364058-10365057 Phaseolus vulgaris
Phvul.009G053900 2.0kb upstream 2.0kb upstream 14128 true Chr09: 10349930-10364057 Phaseolus vulgaris
Phvul.009G053900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10349930-10351929 Phaseolus vulgaris
Phvul.009G053900 2.0kb downstream 2.0kb downstream 14128 true Chr09: 10351930-10366057 Phaseolus vulgaris
Phvul.009G053900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10364058-10366057 Phaseolus vulgaris
Phvul.009G053900 5.0kb upstream 5.0kb upstream 17128 true Chr09: 10346930-10364057 Phaseolus vulgaris
Phvul.009G053900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10346930-10351929 Phaseolus vulgaris
Phvul.009G053900 5.0kb downstream 5.0kb downstream 17128 true Chr09: 10351930-10369057 Phaseolus vulgaris
Phvul.009G053900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10364058-10369057 Phaseolus vulgaris
Phvul.009G053900 10.0kb upstream 10.0kb upstream 22128 true Chr09: 10341930-10364057 Phaseolus vulgaris
Phvul.009G053900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10341930-10351929 Phaseolus vulgaris
Phvul.009G053900 10.0kb downstream 10.0kb downstream 22128 true Chr09: 10351930-10374057 Phaseolus vulgaris
Phvul.009G053900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10364058-10374057 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308491 5265 Fabidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.47987 0.0 22.1736   Low
cufflinks 16.3666 0.0 45.0044    
cufflinks 48.5683 0.0 155.2 High  
cufflinks 8.45041 0.0 22.0201   Low
cufflinks 69.9313 0.0 237.414 High High
cufflinks 21.6388 0.0 61.3746    
cufflinks 36.7538 0.0 112.493 High  
cufflinks 45.9539 0.0 146.587 High  
cufflinks 28.1882 0.0 82.6596    
cufflinks 16.5026 0.0 45.3451    
cufflinks 29.7779 0.0 87.5313    

0 Strain