Gene : Phvul.006G165300 P. vulgaris v2.1
Defline:  (1 of 1) K10609 - cullin 4 (CUL4) Genomic Order:  1650
Name:  ? Phvul.006G165300 Secondary Identifier:  ? PAC:37174217
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G165300 0.5kb upstream 0.5kb upstream 15249 true Chr06: 26838787-26854035 Phaseolus vulgaris
Phvul.006G165300 0.5kb upstream 0.5kb upstream 500 false Chr06: 26838787-26839286 Phaseolus vulgaris
Phvul.006G165300 0.5kb downstream 0.5kb downstream 15249 true Chr06: 26839287-26854535 Phaseolus vulgaris
Phvul.006G165300 0.5kb downstream 0.5kb downstream 500 false Chr06: 26854036-26854535 Phaseolus vulgaris
Phvul.006G165300 1.0kb upstream 1.0kb upstream 15749 true Chr06: 26838287-26854035 Phaseolus vulgaris
Phvul.006G165300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26838287-26839286 Phaseolus vulgaris
Phvul.006G165300 1.0kb downstream 1.0kb downstream 15749 true Chr06: 26839287-26855035 Phaseolus vulgaris
Phvul.006G165300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26854036-26855035 Phaseolus vulgaris
Phvul.006G165300 2.0kb upstream 2.0kb upstream 16749 true Chr06: 26837287-26854035 Phaseolus vulgaris
Phvul.006G165300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26837287-26839286 Phaseolus vulgaris
Phvul.006G165300 2.0kb downstream 2.0kb downstream 16749 true Chr06: 26839287-26856035 Phaseolus vulgaris
Phvul.006G165300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26854036-26856035 Phaseolus vulgaris
Phvul.006G165300 5.0kb upstream 5.0kb upstream 19749 true Chr06: 26834287-26854035 Phaseolus vulgaris
Phvul.006G165300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26834287-26839286 Phaseolus vulgaris
Phvul.006G165300 5.0kb downstream 5.0kb downstream 19749 true Chr06: 26839287-26859035 Phaseolus vulgaris
Phvul.006G165300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26854036-26859035 Phaseolus vulgaris
Phvul.006G165300 10.0kb upstream 10.0kb upstream 24749 true Chr06: 26829287-26854035 Phaseolus vulgaris
Phvul.006G165300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26829287-26839286 Phaseolus vulgaris
Phvul.006G165300 10.0kb downstream 10.0kb downstream 24749 true Chr06: 26839287-26864035 Phaseolus vulgaris
Phvul.006G165300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26854036-26864035 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300226 5265 Fabidae View MSA
124065807 5270 Rosid View MSA
123747222 5271 Pentapetalae View MSA
122785909 5272 Eudicot View MSA
122047217 5273 Angiosperm View MSA
121346252 5274 Embryophyte View MSA
123427758 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5792 0.0 56.0357    
cufflinks 23.3034 0.0 60.6072    
cufflinks 32.6782 0.0 86.7106    
cufflinks 15.8934 0.0 41.0893   Low
cufflinks 22.1905 0.0 57.5559    
cufflinks 32.8126 0.0 86.93 High High
cufflinks 29.7515 0.0 78.3162 High  
cufflinks 29.1572 0.0 76.8347 High  
cufflinks 32.5269 0.0 85.9872 High  
cufflinks 28.6164 0.0 75.0421    
cufflinks 24.9333 0.0 64.8977    

0 Strain