Gene : Phvul.006G152700 P. vulgaris v2.1
Defline:  (1 of 1) K01687 - dihydroxy-acid dehydratase (ilvD) Genomic Order:  1525
Name:  ? Phvul.006G152700 Secondary Identifier:  ? PAC:37172231
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris BRANCHED-CHAIN-AA-SYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris ILEUSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3001 Phaseolus vulgaris pathologic  
Pvulgaris VALSYN-PWY Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G152700 0.5kb upstream 0.5kb upstream 6219 true Chr06: 25792016-25798234 Phaseolus vulgaris
Phvul.006G152700 0.5kb upstream 0.5kb upstream 500 false Chr06: 25792016-25792515 Phaseolus vulgaris
Phvul.006G152700 0.5kb downstream 0.5kb downstream 6219 true Chr06: 25792516-25798734 Phaseolus vulgaris
Phvul.006G152700 0.5kb downstream 0.5kb downstream 500 false Chr06: 25798235-25798734 Phaseolus vulgaris
Phvul.006G152700 1.0kb upstream 1.0kb upstream 6719 true Chr06: 25791516-25798234 Phaseolus vulgaris
Phvul.006G152700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25791516-25792515 Phaseolus vulgaris
Phvul.006G152700 1.0kb downstream 1.0kb downstream 6719 true Chr06: 25792516-25799234 Phaseolus vulgaris
Phvul.006G152700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25798235-25799234 Phaseolus vulgaris
Phvul.006G152700 2.0kb upstream 2.0kb upstream 7719 true Chr06: 25790516-25798234 Phaseolus vulgaris
Phvul.006G152700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25790516-25792515 Phaseolus vulgaris
Phvul.006G152700 2.0kb downstream 2.0kb downstream 7719 true Chr06: 25792516-25800234 Phaseolus vulgaris
Phvul.006G152700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25798235-25800234 Phaseolus vulgaris
Phvul.006G152700 5.0kb upstream 5.0kb upstream 10719 true Chr06: 25787516-25798234 Phaseolus vulgaris
Phvul.006G152700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25787516-25792515 Phaseolus vulgaris
Phvul.006G152700 5.0kb downstream 5.0kb downstream 10719 true Chr06: 25792516-25803234 Phaseolus vulgaris
Phvul.006G152700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25798235-25803234 Phaseolus vulgaris
Phvul.006G152700 10.0kb upstream 10.0kb upstream 15719 true Chr06: 25782516-25798234 Phaseolus vulgaris
Phvul.006G152700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25782516-25792515 Phaseolus vulgaris
Phvul.006G152700 10.0kb downstream 10.0kb downstream 15719 true Chr06: 25792516-25808234 Phaseolus vulgaris
Phvul.006G152700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25798235-25808234 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301834 5265 Fabidae View MSA
124066376 5270 Rosid View MSA
123742145 5271 Pentapetalae View MSA
122787783 5272 Eudicot View MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7469 0.0 28.0357   Low
cufflinks 35.1137 0.0 93.0333 High High
cufflinks 29.2129 0.0 76.5184   High
cufflinks 14.855 0.0 38.4467    
cufflinks 23.0719 0.0 59.8531    
cufflinks 29.2264 0.0 76.5966   High
cufflinks 13.5301 0.0 35.0264    
cufflinks 22.5786 0.0 58.6453    
cufflinks 14.6833 0.0 37.9842    
cufflinks 15.4517 0.0 39.9613    
cufflinks 21.5018 0.0 55.7101    

0 Strain