Gene : Phvul.009G047500 P. vulgaris v2.1
Defline:  (1 of 41) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  477
Name:  ? Phvul.009G047500 Secondary Identifier:  ? PAC:37151701
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G047500 0.5kb upstream 0.5kb upstream 2580 true Chr09: 9387399-9389978 Phaseolus vulgaris
Phvul.009G047500 0.5kb upstream 0.5kb upstream 500 false Chr09: 9389479-9389978 Phaseolus vulgaris
Phvul.009G047500 0.5kb downstream 0.5kb downstream 2580 true Chr09: 9386899-9389478 Phaseolus vulgaris
Phvul.009G047500 0.5kb downstream 0.5kb downstream 500 false Chr09: 9386899-9387398 Phaseolus vulgaris
Phvul.009G047500 1.0kb upstream 1.0kb upstream 3080 true Chr09: 9387399-9390478 Phaseolus vulgaris
Phvul.009G047500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9389479-9390478 Phaseolus vulgaris
Phvul.009G047500 1.0kb downstream 1.0kb downstream 3080 true Chr09: 9386399-9389478 Phaseolus vulgaris
Phvul.009G047500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9386399-9387398 Phaseolus vulgaris
Phvul.009G047500 2.0kb upstream 2.0kb upstream 4080 true Chr09: 9387399-9391478 Phaseolus vulgaris
Phvul.009G047500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9389479-9391478 Phaseolus vulgaris
Phvul.009G047500 2.0kb downstream 2.0kb downstream 4080 true Chr09: 9385399-9389478 Phaseolus vulgaris
Phvul.009G047500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9385399-9387398 Phaseolus vulgaris
Phvul.009G047500 5.0kb upstream 5.0kb upstream 7080 true Chr09: 9387399-9394478 Phaseolus vulgaris
Phvul.009G047500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9389479-9394478 Phaseolus vulgaris
Phvul.009G047500 5.0kb downstream 5.0kb downstream 7080 true Chr09: 9382399-9389478 Phaseolus vulgaris
Phvul.009G047500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9382399-9387398 Phaseolus vulgaris
Phvul.009G047500 10.0kb upstream 10.0kb upstream 12080 true Chr09: 9387399-9399478 Phaseolus vulgaris
Phvul.009G047500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9389479-9399478 Phaseolus vulgaris
Phvul.009G047500 10.0kb downstream 10.0kb downstream 12080 true Chr09: 9377399-9389478 Phaseolus vulgaris
Phvul.009G047500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9377399-9387398 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301087 5265 Fabidae View MSA
124070858 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1727 0.0 30.3894    
cufflinks 27.5004 0.0 71.1658   High
cufflinks 7.10684 0.0 20.0877   Low
cufflinks 18.7313 0.0 49.1484    
cufflinks 13.885 0.0 37.2539    
cufflinks 8.53177 0.0 23.7482   Low
cufflinks 23.5374 0.0 61.0898    
cufflinks 16.0669 0.0 42.4139    
cufflinks 12.4146 0.0 33.4645    
cufflinks 23.5073 0.0 61.0368    
cufflinks 20.8553 0.0 54.449    

0 Strain