Gene : Phvul.006G139600 P. vulgaris v2.1
Defline:  (1 of 4) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) Genomic Order:  1391
Name:  ? Phvul.006G139600 Secondary Identifier:  ? PAC:37173556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G139600 0.5kb upstream 0.5kb upstream 3520 true Chr06: 24672457-24675976 Phaseolus vulgaris
Phvul.006G139600 0.5kb upstream 0.5kb upstream 500 false Chr06: 24672457-24672956 Phaseolus vulgaris
Phvul.006G139600 0.5kb downstream 0.5kb downstream 3520 true Chr06: 24672957-24676476 Phaseolus vulgaris
Phvul.006G139600 0.5kb downstream 0.5kb downstream 500 false Chr06: 24675977-24676476 Phaseolus vulgaris
Phvul.006G139600 1.0kb upstream 1.0kb upstream 4020 true Chr06: 24671957-24675976 Phaseolus vulgaris
Phvul.006G139600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24671957-24672956 Phaseolus vulgaris
Phvul.006G139600 1.0kb downstream 1.0kb downstream 4020 true Chr06: 24672957-24676976 Phaseolus vulgaris
Phvul.006G139600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24675977-24676976 Phaseolus vulgaris
Phvul.006G139600 2.0kb upstream 2.0kb upstream 5020 true Chr06: 24670957-24675976 Phaseolus vulgaris
Phvul.006G139600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24670957-24672956 Phaseolus vulgaris
Phvul.006G139600 2.0kb downstream 2.0kb downstream 5020 true Chr06: 24672957-24677976 Phaseolus vulgaris
Phvul.006G139600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24675977-24677976 Phaseolus vulgaris
Phvul.006G139600 5.0kb upstream 5.0kb upstream 8020 true Chr06: 24667957-24675976 Phaseolus vulgaris
Phvul.006G139600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24667957-24672956 Phaseolus vulgaris
Phvul.006G139600 5.0kb downstream 5.0kb downstream 8020 true Chr06: 24672957-24680976 Phaseolus vulgaris
Phvul.006G139600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24675977-24680976 Phaseolus vulgaris
Phvul.006G139600 10.0kb upstream 10.0kb upstream 13020 true Chr06: 24662957-24675976 Phaseolus vulgaris
Phvul.006G139600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24662957-24672956 Phaseolus vulgaris
Phvul.006G139600 10.0kb downstream 10.0kb downstream 13020 true Chr06: 24672957-24685976 Phaseolus vulgaris
Phvul.006G139600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24675977-24685976 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308505 5265 Fabidae View MSA
124063365 5270 Rosid View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1982 0.0 45.7348    
cufflinks 29.4483 0.0 76.3843    
cufflinks 17.1374 0.0 45.5912    
cufflinks 38.7114 0.0 100.062 High High
cufflinks 22.7706 0.0 59.6397    
cufflinks 18.4006 0.0 48.778    
cufflinks 21.7998 0.0 57.1915    
cufflinks 19.5451 0.0 51.6152    
cufflinks 15.3839 0.0 41.3644   Low
cufflinks 33.0995 0.0 85.673   High
cufflinks 34.792 0.0 90.0005 High High

0 Strain