Gene : Phvul.006G139300 P. vulgaris v2.1
Defline:  (1 of 6) 3.6.1.13//3.6.1.22//3.6.1.53 - ADP-ribose diphosphatase / ADPR-PPase // NAD(+) diphosphatase / NADP pyrophosphatase // Mn(2+)-dependent ADP-ribose/CDP-alcohol diphosphatase / Mn(2+)-dependent ADP-ribose/CDP-alcohol pyrophosphatase Genomic Order:  1388
Name:  ? Phvul.006G139300 Secondary Identifier:  ? PAC:37172536
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5381 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G139300 0.5kb upstream 0.5kb upstream 5114 true Chr06: 24654845-24659958 Phaseolus vulgaris
Phvul.006G139300 0.5kb upstream 0.5kb upstream 500 false Chr06: 24654845-24655344 Phaseolus vulgaris
Phvul.006G139300 0.5kb downstream 0.5kb downstream 5114 true Chr06: 24655345-24660458 Phaseolus vulgaris
Phvul.006G139300 0.5kb downstream 0.5kb downstream 500 false Chr06: 24659959-24660458 Phaseolus vulgaris
Phvul.006G139300 1.0kb upstream 1.0kb upstream 5614 true Chr06: 24654345-24659958 Phaseolus vulgaris
Phvul.006G139300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24654345-24655344 Phaseolus vulgaris
Phvul.006G139300 1.0kb downstream 1.0kb downstream 5614 true Chr06: 24655345-24660958 Phaseolus vulgaris
Phvul.006G139300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24659959-24660958 Phaseolus vulgaris
Phvul.006G139300 2.0kb upstream 2.0kb upstream 6614 true Chr06: 24653345-24659958 Phaseolus vulgaris
Phvul.006G139300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24653345-24655344 Phaseolus vulgaris
Phvul.006G139300 2.0kb downstream 2.0kb downstream 6614 true Chr06: 24655345-24661958 Phaseolus vulgaris
Phvul.006G139300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24659959-24661958 Phaseolus vulgaris
Phvul.006G139300 5.0kb upstream 5.0kb upstream 9614 true Chr06: 24650345-24659958 Phaseolus vulgaris
Phvul.006G139300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24650345-24655344 Phaseolus vulgaris
Phvul.006G139300 5.0kb downstream 5.0kb downstream 9614 true Chr06: 24655345-24664958 Phaseolus vulgaris
Phvul.006G139300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24659959-24664958 Phaseolus vulgaris
Phvul.006G139300 10.0kb upstream 10.0kb upstream 14614 true Chr06: 24645345-24659958 Phaseolus vulgaris
Phvul.006G139300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24645345-24655344 Phaseolus vulgaris
Phvul.006G139300 10.0kb downstream 10.0kb downstream 14614 true Chr06: 24655345-24669958 Phaseolus vulgaris
Phvul.006G139300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24659959-24669958 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314396 5265 Fabidae View MSA
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.29509 0.0 20.9659    
cufflinks 5.55319 0.0 16.4741    
cufflinks 8.76077 0.0 24.6605   High
cufflinks 6.53219 0.0 19.1375    
cufflinks 4.97467 0.0 15.0826    
cufflinks 8.21589 0.0 23.3581    
cufflinks 5.73572 0.0 16.9731    
cufflinks 10.2545 0.0 28.4406   High
cufflinks 2.80715 0.0 9.04212   Low
cufflinks 6.13254 0.0 18.0051    
cufflinks 5.40271 0.0 16.1829    

0 Strain