Gene : Phvul.006G138500 P. vulgaris v2.1
Defline:  (1 of 1) 2.1.1.221 - tRNA (guanine(9)-N(1))-methyltransferase / tRNA m(1)G(9)-methyltransferase Genomic Order:  1379
Name:  ? Phvul.006G138500 Secondary Identifier:  ? PAC:37172529
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G138500 0.5kb upstream 0.5kb upstream 2882 true Chr06: 24571006-24573887 Phaseolus vulgaris
Phvul.006G138500 0.5kb upstream 0.5kb upstream 500 false Chr06: 24571006-24571505 Phaseolus vulgaris
Phvul.006G138500 0.5kb downstream 0.5kb downstream 2882 true Chr06: 24571506-24574387 Phaseolus vulgaris
Phvul.006G138500 0.5kb downstream 0.5kb downstream 500 false Chr06: 24573888-24574387 Phaseolus vulgaris
Phvul.006G138500 1.0kb upstream 1.0kb upstream 3382 true Chr06: 24570506-24573887 Phaseolus vulgaris
Phvul.006G138500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24570506-24571505 Phaseolus vulgaris
Phvul.006G138500 1.0kb downstream 1.0kb downstream 3382 true Chr06: 24571506-24574887 Phaseolus vulgaris
Phvul.006G138500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24573888-24574887 Phaseolus vulgaris
Phvul.006G138500 2.0kb upstream 2.0kb upstream 4382 true Chr06: 24569506-24573887 Phaseolus vulgaris
Phvul.006G138500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24569506-24571505 Phaseolus vulgaris
Phvul.006G138500 2.0kb downstream 2.0kb downstream 4382 true Chr06: 24571506-24575887 Phaseolus vulgaris
Phvul.006G138500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24573888-24575887 Phaseolus vulgaris
Phvul.006G138500 5.0kb upstream 5.0kb upstream 7382 true Chr06: 24566506-24573887 Phaseolus vulgaris
Phvul.006G138500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24566506-24571505 Phaseolus vulgaris
Phvul.006G138500 5.0kb downstream 5.0kb downstream 7382 true Chr06: 24571506-24578887 Phaseolus vulgaris
Phvul.006G138500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24573888-24578887 Phaseolus vulgaris
Phvul.006G138500 10.0kb upstream 10.0kb upstream 12382 true Chr06: 24561506-24573887 Phaseolus vulgaris
Phvul.006G138500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24561506-24571505 Phaseolus vulgaris
Phvul.006G138500 10.0kb downstream 10.0kb downstream 12382 true Chr06: 24571506-24583887 Phaseolus vulgaris
Phvul.006G138500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24573888-24583887 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305141 5265 Fabidae View MSA
124050297 5270 Rosid View MSA
123736559 5271 Pentapetalae View MSA
122793460 5272 Eudicot View MSA
122046397 5273 Angiosperm View MSA
121347986 5274 Embryophyte View MSA
123427480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2287 0.0 34.9213    
cufflinks 21.0329 0.0 54.5097   High
cufflinks 15.4708 0.0 40.671    
cufflinks 15.072 0.0 39.6152    
cufflinks 15.5273 0.0 40.7828    
cufflinks 12.5529 0.0 33.3443    
cufflinks 11.3314 0.0 30.1217   Low
cufflinks 11.7164 0.0 31.1595   Low
cufflinks 13.9031 0.0 36.4955    
cufflinks 18.1286 0.0 47.1828   High
cufflinks 15.1948 0.0 39.7948    

0 Strain