Gene : Phvul.006G138700 P. vulgaris v2.1
Defline:  (1 of 17) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1381
Name:  ? Phvul.006G138700 Secondary Identifier:  ? PAC:37174169
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G138700 0.5kb upstream 0.5kb upstream 1062 true Chr06: 24589728-24590789 Phaseolus vulgaris
Phvul.006G138700 0.5kb upstream 0.5kb upstream 500 false Chr06: 24589728-24590227 Phaseolus vulgaris
Phvul.006G138700 0.5kb downstream 0.5kb downstream 1062 true Chr06: 24590228-24591289 Phaseolus vulgaris
Phvul.006G138700 0.5kb downstream 0.5kb downstream 500 false Chr06: 24590790-24591289 Phaseolus vulgaris
Phvul.006G138700 1.0kb upstream 1.0kb upstream 1562 true Chr06: 24589228-24590789 Phaseolus vulgaris
Phvul.006G138700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24589228-24590227 Phaseolus vulgaris
Phvul.006G138700 1.0kb downstream 1.0kb downstream 1562 true Chr06: 24590228-24591789 Phaseolus vulgaris
Phvul.006G138700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24590790-24591789 Phaseolus vulgaris
Phvul.006G138700 2.0kb upstream 2.0kb upstream 2562 true Chr06: 24588228-24590789 Phaseolus vulgaris
Phvul.006G138700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24588228-24590227 Phaseolus vulgaris
Phvul.006G138700 2.0kb downstream 2.0kb downstream 2562 true Chr06: 24590228-24592789 Phaseolus vulgaris
Phvul.006G138700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24590790-24592789 Phaseolus vulgaris
Phvul.006G138700 5.0kb upstream 5.0kb upstream 5562 true Chr06: 24585228-24590789 Phaseolus vulgaris
Phvul.006G138700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24585228-24590227 Phaseolus vulgaris
Phvul.006G138700 5.0kb downstream 5.0kb downstream 5562 true Chr06: 24590228-24595789 Phaseolus vulgaris
Phvul.006G138700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24590790-24595789 Phaseolus vulgaris
Phvul.006G138700 10.0kb upstream 10.0kb upstream 10562 true Chr06: 24580228-24590789 Phaseolus vulgaris
Phvul.006G138700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24580228-24590227 Phaseolus vulgaris
Phvul.006G138700 10.0kb downstream 10.0kb downstream 10562 true Chr06: 24590228-24600789 Phaseolus vulgaris
Phvul.006G138700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24590790-24600789 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618085 5273 Angiosperm View MSA
122254929 5265 Fabidae View MSA
123996871 5270 Rosid View MSA
123571265 5271 Pentapetalae View MSA
122605993 5272 Eudicot View MSA
120890202 5274 Embryophyte View MSA
122930874 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.7988 0.0 3.23666    
cufflinks 4.61955 0.0 16.1899    
cufflinks 0.349689 0.0 1.52411 Low  
cufflinks 0.938774 0.0 3.76372    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1479.04 0.0 4785.69 High High
cufflinks 0.212848 0.0 0.98063 Low  

0 Strain