Gene : Phvul.009G038900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF103 - PEPTIDASE M20 FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  389
Name:  ? Phvul.009G038900 Secondary Identifier:  ? PAC:37148700
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G038900 0.5kb upstream 0.5kb upstream 4865 true Chr09: 8240919-8245783 Phaseolus vulgaris
Phvul.009G038900 0.5kb upstream 0.5kb upstream 500 false Chr09: 8245284-8245783 Phaseolus vulgaris
Phvul.009G038900 0.5kb downstream 0.5kb downstream 4865 true Chr09: 8240419-8245283 Phaseolus vulgaris
Phvul.009G038900 0.5kb downstream 0.5kb downstream 500 false Chr09: 8240419-8240918 Phaseolus vulgaris
Phvul.009G038900 1.0kb upstream 1.0kb upstream 5365 true Chr09: 8240919-8246283 Phaseolus vulgaris
Phvul.009G038900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8245284-8246283 Phaseolus vulgaris
Phvul.009G038900 1.0kb downstream 1.0kb downstream 5365 true Chr09: 8239919-8245283 Phaseolus vulgaris
Phvul.009G038900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8239919-8240918 Phaseolus vulgaris
Phvul.009G038900 2.0kb upstream 2.0kb upstream 6365 true Chr09: 8240919-8247283 Phaseolus vulgaris
Phvul.009G038900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8245284-8247283 Phaseolus vulgaris
Phvul.009G038900 2.0kb downstream 2.0kb downstream 6365 true Chr09: 8238919-8245283 Phaseolus vulgaris
Phvul.009G038900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8238919-8240918 Phaseolus vulgaris
Phvul.009G038900 5.0kb upstream 5.0kb upstream 9365 true Chr09: 8240919-8250283 Phaseolus vulgaris
Phvul.009G038900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8245284-8250283 Phaseolus vulgaris
Phvul.009G038900 5.0kb downstream 5.0kb downstream 9365 true Chr09: 8235919-8245283 Phaseolus vulgaris
Phvul.009G038900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8235919-8240918 Phaseolus vulgaris
Phvul.009G038900 10.0kb upstream 10.0kb upstream 14365 true Chr09: 8240919-8255283 Phaseolus vulgaris
Phvul.009G038900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8245284-8255283 Phaseolus vulgaris
Phvul.009G038900 10.0kb downstream 10.0kb downstream 14365 true Chr09: 8230919-8245283 Phaseolus vulgaris
Phvul.009G038900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8230919-8240918 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312528 5265 Fabidae View MSA
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.37098 0.0 15.2659    
cufflinks 3.00461 0.0 9.07493    
cufflinks 8.60848 0.0 23.3615   High
cufflinks 3.64286 0.0 10.8134    
cufflinks 2.7209 0.0 8.35369    
cufflinks 5.32365 0.0 15.0839    
cufflinks 4.3445 0.0 12.5469    
cufflinks 3.01808 0.0 9.07914    
cufflinks 5.84258 0.0 16.388    
cufflinks 1.38569 0.0 4.58726   Low
cufflinks 3.03551 0.0 9.19092    

0 Strain