Gene : Phvul.009G025800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13793:SF96 - PHD FINGER-CONTAINING PROTEIN Genomic Order:  255
Name:  ? Phvul.009G025800 Secondary Identifier:  ? PAC:37150495
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G025800 0.5kb upstream 0.5kb upstream 14325 true Chr09: 6206350-6220674 Phaseolus vulgaris
Phvul.009G025800 0.5kb upstream 0.5kb upstream 500 false Chr09: 6206350-6206849 Phaseolus vulgaris
Phvul.009G025800 0.5kb downstream 0.5kb downstream 14325 true Chr09: 6206850-6221174 Phaseolus vulgaris
Phvul.009G025800 0.5kb downstream 0.5kb downstream 500 false Chr09: 6220675-6221174 Phaseolus vulgaris
Phvul.009G025800 1.0kb upstream 1.0kb upstream 14825 true Chr09: 6205850-6220674 Phaseolus vulgaris
Phvul.009G025800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6205850-6206849 Phaseolus vulgaris
Phvul.009G025800 1.0kb downstream 1.0kb downstream 14825 true Chr09: 6206850-6221674 Phaseolus vulgaris
Phvul.009G025800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6220675-6221674 Phaseolus vulgaris
Phvul.009G025800 2.0kb upstream 2.0kb upstream 15825 true Chr09: 6204850-6220674 Phaseolus vulgaris
Phvul.009G025800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6204850-6206849 Phaseolus vulgaris
Phvul.009G025800 2.0kb downstream 2.0kb downstream 15825 true Chr09: 6206850-6222674 Phaseolus vulgaris
Phvul.009G025800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6220675-6222674 Phaseolus vulgaris
Phvul.009G025800 5.0kb upstream 5.0kb upstream 18825 true Chr09: 6201850-6220674 Phaseolus vulgaris
Phvul.009G025800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6201850-6206849 Phaseolus vulgaris
Phvul.009G025800 5.0kb downstream 5.0kb downstream 18825 true Chr09: 6206850-6225674 Phaseolus vulgaris
Phvul.009G025800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6220675-6225674 Phaseolus vulgaris
Phvul.009G025800 10.0kb upstream 10.0kb upstream 23825 true Chr09: 6196850-6220674 Phaseolus vulgaris
Phvul.009G025800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6196850-6206849 Phaseolus vulgaris
Phvul.009G025800 10.0kb downstream 10.0kb downstream 23825 true Chr09: 6206850-6230674 Phaseolus vulgaris
Phvul.009G025800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6220675-6230674 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299417 5265 Fabidae View MSA
124068421 5270 Rosid View MSA
123739251 5271 Pentapetalae View MSA
122790034 5272 Eudicot View MSA
122046263 5273 Angiosperm View MSA
121347931 5274 Embryophyte View MSA
123426077 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.64375 0.0 7.17693   Low
cufflinks 7.82086 0.0 20.216    
cufflinks 16.6086 0.0 44.2315   High
cufflinks 2.5313 0.0 6.96861   Low
cufflinks 7.32563 0.0 18.9442    
cufflinks 17.485 0.0 46.7179   High
cufflinks 11.2646 0.0 29.3272    
cufflinks 10.8554 0.0 28.2647    
cufflinks 9.24538 0.0 23.9292    
cufflinks 13.5471 0.0 35.5344    
cufflinks 6.09684 0.0 15.8109    

0 Strain