Gene : Phvul.009G023800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR27000:SF96 - LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN Genomic Order:  236
Name:  ? Phvul.009G023800 Secondary Identifier:  ? PAC:37150867
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G023800 0.5kb upstream 0.5kb upstream 5071 true Chr09: 5775922-5780992 Phaseolus vulgaris
Phvul.009G023800 0.5kb upstream 0.5kb upstream 500 false Chr09: 5775922-5776421 Phaseolus vulgaris
Phvul.009G023800 0.5kb downstream 0.5kb downstream 5071 true Chr09: 5776422-5781492 Phaseolus vulgaris
Phvul.009G023800 0.5kb downstream 0.5kb downstream 500 false Chr09: 5780993-5781492 Phaseolus vulgaris
Phvul.009G023800 1.0kb upstream 1.0kb upstream 5571 true Chr09: 5775422-5780992 Phaseolus vulgaris
Phvul.009G023800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5775422-5776421 Phaseolus vulgaris
Phvul.009G023800 1.0kb downstream 1.0kb downstream 5571 true Chr09: 5776422-5781992 Phaseolus vulgaris
Phvul.009G023800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5780993-5781992 Phaseolus vulgaris
Phvul.009G023800 2.0kb upstream 2.0kb upstream 6571 true Chr09: 5774422-5780992 Phaseolus vulgaris
Phvul.009G023800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5774422-5776421 Phaseolus vulgaris
Phvul.009G023800 2.0kb downstream 2.0kb downstream 6571 true Chr09: 5776422-5782992 Phaseolus vulgaris
Phvul.009G023800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5780993-5782992 Phaseolus vulgaris
Phvul.009G023800 5.0kb upstream 5.0kb upstream 9571 true Chr09: 5771422-5780992 Phaseolus vulgaris
Phvul.009G023800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5771422-5776421 Phaseolus vulgaris
Phvul.009G023800 5.0kb downstream 5.0kb downstream 9571 true Chr09: 5776422-5785992 Phaseolus vulgaris
Phvul.009G023800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5780993-5785992 Phaseolus vulgaris
Phvul.009G023800 10.0kb upstream 10.0kb upstream 14571 true Chr09: 5766422-5780992 Phaseolus vulgaris
Phvul.009G023800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5766422-5776421 Phaseolus vulgaris
Phvul.009G023800 10.0kb downstream 10.0kb downstream 14571 true Chr09: 5776422-5790992 Phaseolus vulgaris
Phvul.009G023800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5780993-5790992 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314352 5265 Fabidae View MSA
124071845 5270 Rosid View MSA
123751377 5271 Pentapetalae View MSA
122793717 5272 Eudicot View MSA
122043581 5273 Angiosperm View MSA
121347798 5274 Embryophyte View MSA
123380630 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8188 0.0 5.59372   Low
cufflinks 6.11543 0.0 16.6564    
cufflinks 7.90012 0.0 21.038    
cufflinks 3.77554 0.0 10.7832    
cufflinks 6.50324 0.0 17.6464    
cufflinks 7.82834 0.0 20.9007    
cufflinks 8.21914 0.0 21.8845    
cufflinks 5.36301 0.0 14.7431    
cufflinks 15.1654 0.0 39.2902   High
cufflinks 9.2459 0.0 24.3883    
cufflinks 6.02866 0.0 16.481    

0 Strain