Gene : Phvul.006G130900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15140 - TUBULIN-SPECIFIC CHAPERONE E Genomic Order:  1305
Name:  ? Phvul.006G130900 Secondary Identifier:  ? PAC:37174149
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G130900 0.5kb upstream 0.5kb upstream 18745 true Chr06: 23927825-23946569 Phaseolus vulgaris
Phvul.006G130900 0.5kb upstream 0.5kb upstream 500 false Chr06: 23927825-23928324 Phaseolus vulgaris
Phvul.006G130900 0.5kb downstream 0.5kb downstream 18745 true Chr06: 23928325-23947069 Phaseolus vulgaris
Phvul.006G130900 0.5kb downstream 0.5kb downstream 500 false Chr06: 23946570-23947069 Phaseolus vulgaris
Phvul.006G130900 1.0kb upstream 1.0kb upstream 19245 true Chr06: 23927325-23946569 Phaseolus vulgaris
Phvul.006G130900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23927325-23928324 Phaseolus vulgaris
Phvul.006G130900 1.0kb downstream 1.0kb downstream 19245 true Chr06: 23928325-23947569 Phaseolus vulgaris
Phvul.006G130900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23946570-23947569 Phaseolus vulgaris
Phvul.006G130900 2.0kb upstream 2.0kb upstream 20245 true Chr06: 23926325-23946569 Phaseolus vulgaris
Phvul.006G130900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23926325-23928324 Phaseolus vulgaris
Phvul.006G130900 2.0kb downstream 2.0kb downstream 20245 true Chr06: 23928325-23948569 Phaseolus vulgaris
Phvul.006G130900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23946570-23948569 Phaseolus vulgaris
Phvul.006G130900 5.0kb upstream 5.0kb upstream 23245 true Chr06: 23923325-23946569 Phaseolus vulgaris
Phvul.006G130900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23923325-23928324 Phaseolus vulgaris
Phvul.006G130900 5.0kb downstream 5.0kb downstream 23245 true Chr06: 23928325-23951569 Phaseolus vulgaris
Phvul.006G130900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23946570-23951569 Phaseolus vulgaris
Phvul.006G130900 10.0kb upstream 10.0kb upstream 28245 true Chr06: 23918325-23946569 Phaseolus vulgaris
Phvul.006G130900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23918325-23928324 Phaseolus vulgaris
Phvul.006G130900 10.0kb downstream 10.0kb downstream 28245 true Chr06: 23928325-23956569 Phaseolus vulgaris
Phvul.006G130900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23946570-23956569 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304026 5265 Fabidae View MSA
124069178 5270 Rosid View MSA
123740521 5271 Pentapetalae View MSA
122789325 5272 Eudicot View MSA
122048021 5273 Angiosperm View MSA
121345532 5274 Embryophyte View MSA
123427074 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.69632 0.0 13.8916    
cufflinks 5.273 0.0 15.4294    
cufflinks 5.10699 0.0 14.9289    
cufflinks 3.33566 0.0 10.3732   Low
cufflinks 4.28602 0.0 12.9793    
cufflinks 6.23796 0.0 17.9118   High
cufflinks 4.5168 0.0 13.4918    
cufflinks 5.21307 0.0 15.1933    
cufflinks 4.90647 0.0 14.5489    
cufflinks 6.06093 0.0 17.4612   High
cufflinks 4.44145 0.0 13.3558    

0 Strain