Gene : Phvul.009G024700 P. vulgaris v2.1
Defline:  (1 of 11) PF03181 - BURP domain (BURP) Genomic Order:  244
Name:  ? Phvul.009G024700 Secondary Identifier:  ? PAC:37149201
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G024700 0.5kb upstream 0.5kb upstream 2200 true Chr09: 6024147-6026346 Phaseolus vulgaris
Phvul.009G024700 0.5kb upstream 0.5kb upstream 500 false Chr09: 6024147-6024646 Phaseolus vulgaris
Phvul.009G024700 0.5kb downstream 0.5kb downstream 2200 true Chr09: 6024647-6026846 Phaseolus vulgaris
Phvul.009G024700 0.5kb downstream 0.5kb downstream 500 false Chr09: 6026347-6026846 Phaseolus vulgaris
Phvul.009G024700 1.0kb upstream 1.0kb upstream 2700 true Chr09: 6023647-6026346 Phaseolus vulgaris
Phvul.009G024700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6023647-6024646 Phaseolus vulgaris
Phvul.009G024700 1.0kb downstream 1.0kb downstream 2700 true Chr09: 6024647-6027346 Phaseolus vulgaris
Phvul.009G024700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6026347-6027346 Phaseolus vulgaris
Phvul.009G024700 2.0kb upstream 2.0kb upstream 3700 true Chr09: 6022647-6026346 Phaseolus vulgaris
Phvul.009G024700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6022647-6024646 Phaseolus vulgaris
Phvul.009G024700 2.0kb downstream 2.0kb downstream 3700 true Chr09: 6024647-6028346 Phaseolus vulgaris
Phvul.009G024700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6026347-6028346 Phaseolus vulgaris
Phvul.009G024700 5.0kb upstream 5.0kb upstream 6700 true Chr09: 6019647-6026346 Phaseolus vulgaris
Phvul.009G024700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6019647-6024646 Phaseolus vulgaris
Phvul.009G024700 5.0kb downstream 5.0kb downstream 6700 true Chr09: 6024647-6031346 Phaseolus vulgaris
Phvul.009G024700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6026347-6031346 Phaseolus vulgaris
Phvul.009G024700 10.0kb upstream 10.0kb upstream 11700 true Chr09: 6014647-6026346 Phaseolus vulgaris
Phvul.009G024700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6014647-6024646 Phaseolus vulgaris
Phvul.009G024700 10.0kb downstream 10.0kb downstream 11700 true Chr09: 6024647-6036346 Phaseolus vulgaris
Phvul.009G024700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6026347-6036346 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313235 5265 Fabidae View MSA
124069569 5270 Rosid View MSA
123746608 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5419 0.0 48.8261    
cufflinks 12.784 0.0 34.6152    
cufflinks 3.60472 0.0 11.077    
cufflinks 4.52983 0.0 13.6012    
cufflinks 32.4526 0.0 83.9856    
cufflinks 1.13099 0.0 3.96179   Low
cufflinks 42.509 0.0 110.115 High  
cufflinks 17.2251 0.0 45.4715    
cufflinks 40.4431 0.0 104.691 High  
cufflinks 3.01589 0.0 9.5271   Low
cufflinks 52.0604 0.0 135.26 High High

0 Strain