Gene : Phvul.009G028700 P. vulgaris v2.1
Defline:  (1 of 1) K11262 - acetyl-CoA carboxylase / biotin carboxylase (ACAC) Genomic Order:  285
Name:  ? Phvul.009G028700 Secondary Identifier:  ? PAC:37151080
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1264 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G028700 0.5kb upstream 0.5kb upstream 16407 true Chr09: 6629084-6645490 Phaseolus vulgaris
Phvul.009G028700 0.5kb upstream 0.5kb upstream 500 false Chr09: 6644991-6645490 Phaseolus vulgaris
Phvul.009G028700 0.5kb downstream 0.5kb downstream 16407 true Chr09: 6628584-6644990 Phaseolus vulgaris
Phvul.009G028700 0.5kb downstream 0.5kb downstream 500 false Chr09: 6628584-6629083 Phaseolus vulgaris
Phvul.009G028700 1.0kb upstream 1.0kb upstream 16907 true Chr09: 6629084-6645990 Phaseolus vulgaris
Phvul.009G028700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6644991-6645990 Phaseolus vulgaris
Phvul.009G028700 1.0kb downstream 1.0kb downstream 16907 true Chr09: 6628084-6644990 Phaseolus vulgaris
Phvul.009G028700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6628084-6629083 Phaseolus vulgaris
Phvul.009G028700 2.0kb upstream 2.0kb upstream 17907 true Chr09: 6629084-6646990 Phaseolus vulgaris
Phvul.009G028700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6644991-6646990 Phaseolus vulgaris
Phvul.009G028700 2.0kb downstream 2.0kb downstream 17907 true Chr09: 6627084-6644990 Phaseolus vulgaris
Phvul.009G028700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6627084-6629083 Phaseolus vulgaris
Phvul.009G028700 5.0kb upstream 5.0kb upstream 20907 true Chr09: 6629084-6649990 Phaseolus vulgaris
Phvul.009G028700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6644991-6649990 Phaseolus vulgaris
Phvul.009G028700 5.0kb downstream 5.0kb downstream 20907 true Chr09: 6624084-6644990 Phaseolus vulgaris
Phvul.009G028700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6624084-6629083 Phaseolus vulgaris
Phvul.009G028700 10.0kb upstream 10.0kb upstream 25907 true Chr09: 6629084-6654990 Phaseolus vulgaris
Phvul.009G028700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6644991-6654990 Phaseolus vulgaris
Phvul.009G028700 10.0kb downstream 10.0kb downstream 25907 true Chr09: 6619084-6644990 Phaseolus vulgaris
Phvul.009G028700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6619084-6629083 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041353 5273 Angiosperm View MSA
122302718 5265 Fabidae View MSA
124064007 5270 Rosid View MSA
123738277 5271 Pentapetalae View MSA
122788155 5272 Eudicot View MSA
121349093 5274 Embryophyte View MSA
123428824 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.87363 0.0 17.8572   Low
cufflinks 15.2837 0.0 41.9209    
cufflinks 39.5006 0.0 123.189 High  
cufflinks 8.01053 0.0 20.8523   Low
cufflinks 25.3582 0.0 73.0997    
cufflinks 53.1737 0.0 174.67 High  
cufflinks 54.3993 0.0 179.741 High High
cufflinks 22.3299 0.0 64.2848    
cufflinks 71.7894 0.0 250.46 High High
cufflinks 32.1421 0.0 96.3052    
cufflinks 19.9269 0.0 55.9187    

0 Strain