Gene : Phvul.009G159300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Genomic Order:  1634
Name:  ? Phvul.009G159300 Secondary Identifier:  ? PAC:37149331
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G159300 0.5kb upstream 0.5kb upstream 6903 true Chr09: 23585366-23592268 Phaseolus vulgaris
Phvul.009G159300 0.5kb upstream 0.5kb upstream 500 false Chr09: 23585366-23585865 Phaseolus vulgaris
Phvul.009G159300 0.5kb downstream 0.5kb downstream 6903 true Chr09: 23585866-23592768 Phaseolus vulgaris
Phvul.009G159300 0.5kb downstream 0.5kb downstream 500 false Chr09: 23592269-23592768 Phaseolus vulgaris
Phvul.009G159300 1.0kb upstream 1.0kb upstream 7403 true Chr09: 23584866-23592268 Phaseolus vulgaris
Phvul.009G159300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23584866-23585865 Phaseolus vulgaris
Phvul.009G159300 1.0kb downstream 1.0kb downstream 7403 true Chr09: 23585866-23593268 Phaseolus vulgaris
Phvul.009G159300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23592269-23593268 Phaseolus vulgaris
Phvul.009G159300 2.0kb upstream 2.0kb upstream 8403 true Chr09: 23583866-23592268 Phaseolus vulgaris
Phvul.009G159300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23583866-23585865 Phaseolus vulgaris
Phvul.009G159300 2.0kb downstream 2.0kb downstream 8403 true Chr09: 23585866-23594268 Phaseolus vulgaris
Phvul.009G159300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23592269-23594268 Phaseolus vulgaris
Phvul.009G159300 5.0kb upstream 5.0kb upstream 11403 true Chr09: 23580866-23592268 Phaseolus vulgaris
Phvul.009G159300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23580866-23585865 Phaseolus vulgaris
Phvul.009G159300 5.0kb downstream 5.0kb downstream 11403 true Chr09: 23585866-23597268 Phaseolus vulgaris
Phvul.009G159300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23592269-23597268 Phaseolus vulgaris
Phvul.009G159300 10.0kb upstream 10.0kb upstream 16403 true Chr09: 23575866-23592268 Phaseolus vulgaris
Phvul.009G159300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23575866-23585865 Phaseolus vulgaris
Phvul.009G159300 10.0kb downstream 10.0kb downstream 16403 true Chr09: 23585866-23602268 Phaseolus vulgaris
Phvul.009G159300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23592269-23602268 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041323 5273 Angiosperm View MSA
122299430 5265 Fabidae View MSA
124066848 5270 Rosid View MSA
123740697 5271 Pentapetalae View MSA
122787992 5272 Eudicot View MSA
121345985 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.9738 0.0 211.414 High High
cufflinks 9.71128 0.0 25.1975    
cufflinks 3.41327 0.0 9.49527   Low
cufflinks 8.96745 0.0 23.3849    
cufflinks 5.3352 0.0 14.3694    
cufflinks 3.88558 0.0 10.6919    
cufflinks 8.48987 0.0 22.1135    
cufflinks 8.08815 0.0 21.0878    
cufflinks 6.26018 0.0 16.5932    
cufflinks 24.6117 0.0 64.8003   High
cufflinks 5.04556 0.0 13.6239    

0 Strain