Gene : Phvul.009G148200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1527
Name:  ? Phvul.009G148200 Secondary Identifier:  ? PAC:37149016
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G148200 0.5kb upstream 0.5kb upstream 2503 true Chr09: 22137067-22139569 Phaseolus vulgaris
Phvul.009G148200 0.5kb upstream 0.5kb upstream 500 false Chr09: 22137067-22137566 Phaseolus vulgaris
Phvul.009G148200 0.5kb downstream 0.5kb downstream 2503 true Chr09: 22137567-22140069 Phaseolus vulgaris
Phvul.009G148200 0.5kb downstream 0.5kb downstream 500 false Chr09: 22139570-22140069 Phaseolus vulgaris
Phvul.009G148200 1.0kb upstream 1.0kb upstream 3003 true Chr09: 22136567-22139569 Phaseolus vulgaris
Phvul.009G148200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22136567-22137566 Phaseolus vulgaris
Phvul.009G148200 1.0kb downstream 1.0kb downstream 3003 true Chr09: 22137567-22140569 Phaseolus vulgaris
Phvul.009G148200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22139570-22140569 Phaseolus vulgaris
Phvul.009G148200 2.0kb upstream 2.0kb upstream 4003 true Chr09: 22135567-22139569 Phaseolus vulgaris
Phvul.009G148200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22135567-22137566 Phaseolus vulgaris
Phvul.009G148200 2.0kb downstream 2.0kb downstream 4003 true Chr09: 22137567-22141569 Phaseolus vulgaris
Phvul.009G148200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22139570-22141569 Phaseolus vulgaris
Phvul.009G148200 5.0kb upstream 5.0kb upstream 7003 true Chr09: 22132567-22139569 Phaseolus vulgaris
Phvul.009G148200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22132567-22137566 Phaseolus vulgaris
Phvul.009G148200 5.0kb downstream 5.0kb downstream 7003 true Chr09: 22137567-22144569 Phaseolus vulgaris
Phvul.009G148200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22139570-22144569 Phaseolus vulgaris
Phvul.009G148200 10.0kb upstream 10.0kb upstream 12003 true Chr09: 22127567-22139569 Phaseolus vulgaris
Phvul.009G148200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22127567-22137566 Phaseolus vulgaris
Phvul.009G148200 10.0kb downstream 10.0kb downstream 12003 true Chr09: 22137567-22149569 Phaseolus vulgaris
Phvul.009G148200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22139570-22149569 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312368 5265 Fabidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8241 0.0 36.0579    
cufflinks 13.9961 0.0 36.512    
cufflinks 3.381 0.0 10.0337   Low
cufflinks 3.43335 0.0 9.98666   Low
cufflinks 25.2668 0.0 65.3952    
cufflinks 6.28578 0.0 17.3901    
cufflinks 23.8598 0.0 61.7474    
cufflinks 13.9982 0.0 36.5378    
cufflinks 15.4887 0.0 40.1685    
cufflinks 33.3662 0.0 87.043   High
cufflinks 24.3873 0.0 63.12    

0 Strain