Gene : Phvul.009G147000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR14379:SF6 - EMB Genomic Order:  1515
Name:  ? Phvul.009G147000 Secondary Identifier:  ? PAC:37151300
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G147000 0.5kb upstream 0.5kb upstream 4174 true Chr09: 21976742-21980915 Phaseolus vulgaris
Phvul.009G147000 0.5kb upstream 0.5kb upstream 500 false Chr09: 21980416-21980915 Phaseolus vulgaris
Phvul.009G147000 0.5kb downstream 0.5kb downstream 4174 true Chr09: 21976242-21980415 Phaseolus vulgaris
Phvul.009G147000 0.5kb downstream 0.5kb downstream 500 false Chr09: 21976242-21976741 Phaseolus vulgaris
Phvul.009G147000 1.0kb upstream 1.0kb upstream 4674 true Chr09: 21976742-21981415 Phaseolus vulgaris
Phvul.009G147000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21980416-21981415 Phaseolus vulgaris
Phvul.009G147000 1.0kb downstream 1.0kb downstream 4674 true Chr09: 21975742-21980415 Phaseolus vulgaris
Phvul.009G147000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21975742-21976741 Phaseolus vulgaris
Phvul.009G147000 2.0kb upstream 2.0kb upstream 5674 true Chr09: 21976742-21982415 Phaseolus vulgaris
Phvul.009G147000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21980416-21982415 Phaseolus vulgaris
Phvul.009G147000 2.0kb downstream 2.0kb downstream 5674 true Chr09: 21974742-21980415 Phaseolus vulgaris
Phvul.009G147000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21974742-21976741 Phaseolus vulgaris
Phvul.009G147000 5.0kb upstream 5.0kb upstream 8674 true Chr09: 21976742-21985415 Phaseolus vulgaris
Phvul.009G147000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21980416-21985415 Phaseolus vulgaris
Phvul.009G147000 5.0kb downstream 5.0kb downstream 8674 true Chr09: 21971742-21980415 Phaseolus vulgaris
Phvul.009G147000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21971742-21976741 Phaseolus vulgaris
Phvul.009G147000 10.0kb upstream 10.0kb upstream 13674 true Chr09: 21976742-21990415 Phaseolus vulgaris
Phvul.009G147000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21980416-21990415 Phaseolus vulgaris
Phvul.009G147000 10.0kb downstream 10.0kb downstream 13674 true Chr09: 21966742-21980415 Phaseolus vulgaris
Phvul.009G147000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21966742-21976741 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297888 5265 Fabidae View MSA
124036199 5270 Rosid View MSA
123747912 5271 Pentapetalae View MSA
122785708 5272 Eudicot View MSA
122049513 5273 Angiosperm View MSA
121311448 5274 Embryophyte View MSA
123348743 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.904333 0.0 3.01602   Low
cufflinks 2.29811 0.0 6.91011   High
cufflinks 1.448 0.0 4.57524    
cufflinks 1.02319 0.0 3.40487   Low
cufflinks 1.65125 0.0 5.19581    
cufflinks 2.09737 0.0 6.36932    
cufflinks 1.52069 0.0 4.791    
cufflinks 1.42234 0.0 4.48122    
cufflinks 1.08945 0.0 3.57575   Low
cufflinks 2.77381 0.0 8.17104   High
cufflinks 1.67118 0.0 5.24461    

0 Strain