Gene : Phvul.009G147800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23354:SF67 - TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN Genomic Order:  1523
Name:  ? Phvul.009G147800 Secondary Identifier:  ? PAC:37150421
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G147800 0.5kb upstream 0.5kb upstream 4555 true Chr09: 22110054-22114608 Phaseolus vulgaris
Phvul.009G147800 0.5kb upstream 0.5kb upstream 500 false Chr09: 22114109-22114608 Phaseolus vulgaris
Phvul.009G147800 0.5kb downstream 0.5kb downstream 4555 true Chr09: 22109554-22114108 Phaseolus vulgaris
Phvul.009G147800 0.5kb downstream 0.5kb downstream 500 false Chr09: 22109554-22110053 Phaseolus vulgaris
Phvul.009G147800 1.0kb upstream 1.0kb upstream 5055 true Chr09: 22110054-22115108 Phaseolus vulgaris
Phvul.009G147800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22114109-22115108 Phaseolus vulgaris
Phvul.009G147800 1.0kb downstream 1.0kb downstream 5055 true Chr09: 22109054-22114108 Phaseolus vulgaris
Phvul.009G147800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22109054-22110053 Phaseolus vulgaris
Phvul.009G147800 2.0kb upstream 2.0kb upstream 6055 true Chr09: 22110054-22116108 Phaseolus vulgaris
Phvul.009G147800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22114109-22116108 Phaseolus vulgaris
Phvul.009G147800 2.0kb downstream 2.0kb downstream 6055 true Chr09: 22108054-22114108 Phaseolus vulgaris
Phvul.009G147800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22108054-22110053 Phaseolus vulgaris
Phvul.009G147800 5.0kb upstream 5.0kb upstream 9055 true Chr09: 22110054-22119108 Phaseolus vulgaris
Phvul.009G147800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22114109-22119108 Phaseolus vulgaris
Phvul.009G147800 5.0kb downstream 5.0kb downstream 9055 true Chr09: 22105054-22114108 Phaseolus vulgaris
Phvul.009G147800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22105054-22110053 Phaseolus vulgaris
Phvul.009G147800 10.0kb upstream 10.0kb upstream 14055 true Chr09: 22110054-22124108 Phaseolus vulgaris
Phvul.009G147800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22114109-22124108 Phaseolus vulgaris
Phvul.009G147800 10.0kb downstream 10.0kb downstream 14055 true Chr09: 22100054-22114108 Phaseolus vulgaris
Phvul.009G147800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22100054-22110053 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308250 5265 Fabidae View MSA
124061375 5270 Rosid View MSA
123739747 5271 Pentapetalae View MSA
122789164 5272 Eudicot View MSA
122042380 5273 Angiosperm View MSA
121345600 5274 Embryophyte View MSA
123380242 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.6216 0.0 102.266   High
cufflinks 16.9716 0.0 61.3718    
cufflinks 12.8883 0.0 47.3285    
cufflinks 15.9778 0.0 45.1351    
cufflinks 21.7907 0.0 75.2073    
cufflinks 5.4434 0.0 22.9848   Low
cufflinks 7.1574 0.0 27.3028    
cufflinks 4.26455 0.0 19.1918   Low
cufflinks 12.1284 0.0 43.523    
cufflinks 33.3988 0.0 117.48   High
cufflinks 11.5017 0.0 41.3042    

0 Strain