Gene : Phvul.009G154300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11085:SF6 - NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-4 Genomic Order:  1584
Name:  ? Phvul.009G154300 Secondary Identifier:  ? PAC:37150528
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G154300 0.5kb upstream 0.5kb upstream 7723 true Chr09: 22878746-22886468 Phaseolus vulgaris
Phvul.009G154300 0.5kb upstream 0.5kb upstream 500 false Chr09: 22878746-22879245 Phaseolus vulgaris
Phvul.009G154300 0.5kb downstream 0.5kb downstream 7723 true Chr09: 22879246-22886968 Phaseolus vulgaris
Phvul.009G154300 0.5kb downstream 0.5kb downstream 500 false Chr09: 22886469-22886968 Phaseolus vulgaris
Phvul.009G154300 1.0kb upstream 1.0kb upstream 8223 true Chr09: 22878246-22886468 Phaseolus vulgaris
Phvul.009G154300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22878246-22879245 Phaseolus vulgaris
Phvul.009G154300 1.0kb downstream 1.0kb downstream 8223 true Chr09: 22879246-22887468 Phaseolus vulgaris
Phvul.009G154300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22886469-22887468 Phaseolus vulgaris
Phvul.009G154300 2.0kb upstream 2.0kb upstream 9223 true Chr09: 22877246-22886468 Phaseolus vulgaris
Phvul.009G154300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22877246-22879245 Phaseolus vulgaris
Phvul.009G154300 2.0kb downstream 2.0kb downstream 9223 true Chr09: 22879246-22888468 Phaseolus vulgaris
Phvul.009G154300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22886469-22888468 Phaseolus vulgaris
Phvul.009G154300 5.0kb upstream 5.0kb upstream 12223 true Chr09: 22874246-22886468 Phaseolus vulgaris
Phvul.009G154300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22874246-22879245 Phaseolus vulgaris
Phvul.009G154300 5.0kb downstream 5.0kb downstream 12223 true Chr09: 22879246-22891468 Phaseolus vulgaris
Phvul.009G154300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22886469-22891468 Phaseolus vulgaris
Phvul.009G154300 10.0kb upstream 10.0kb upstream 17223 true Chr09: 22869246-22886468 Phaseolus vulgaris
Phvul.009G154300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22869246-22879245 Phaseolus vulgaris
Phvul.009G154300 10.0kb downstream 10.0kb downstream 17223 true Chr09: 22879246-22896468 Phaseolus vulgaris
Phvul.009G154300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22886469-22896468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304170 5265 Fabidae View MSA
124064790 5270 Rosid View MSA
123739105 5271 Pentapetalae View MSA
122785980 5272 Eudicot View MSA
122046864 5273 Angiosperm View MSA
121350712 5274 Embryophyte View MSA
123427715 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.61486 0.0 16.2013    
cufflinks 4.25339 0.0 23.4782    
cufflinks 21.2093 0.0 82.6578   High
cufflinks 6.06038 0.0 27.8541    
cufflinks 3.45886 0.0 13.5956    
cufflinks 8.74476 0.0 35.9792   High
cufflinks 2.2284 0.0 13.0823    
cufflinks 3.05976 0.0 14.3355    
cufflinks 1.78612 0.0 10.2132   Low
cufflinks 4.31548 0.0 20.8758    
cufflinks 3.10782 0.0 16.8296    

0 Strain