Gene : Phvul.009G144300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Genomic Order:  1487
Name:  ? Phvul.009G144300 Secondary Identifier:  ? PAC:37150218
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G144300 0.5kb upstream 0.5kb upstream 1346 true Chr09: 21607297-21608642 Phaseolus vulgaris
Phvul.009G144300 0.5kb upstream 0.5kb upstream 500 false Chr09: 21608143-21608642 Phaseolus vulgaris
Phvul.009G144300 0.5kb downstream 0.5kb downstream 1346 true Chr09: 21606797-21608142 Phaseolus vulgaris
Phvul.009G144300 0.5kb downstream 0.5kb downstream 500 false Chr09: 21606797-21607296 Phaseolus vulgaris
Phvul.009G144300 1.0kb upstream 1.0kb upstream 1846 true Chr09: 21607297-21609142 Phaseolus vulgaris
Phvul.009G144300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21608143-21609142 Phaseolus vulgaris
Phvul.009G144300 1.0kb downstream 1.0kb downstream 1846 true Chr09: 21606297-21608142 Phaseolus vulgaris
Phvul.009G144300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21606297-21607296 Phaseolus vulgaris
Phvul.009G144300 2.0kb upstream 2.0kb upstream 2846 true Chr09: 21607297-21610142 Phaseolus vulgaris
Phvul.009G144300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21608143-21610142 Phaseolus vulgaris
Phvul.009G144300 2.0kb downstream 2.0kb downstream 2846 true Chr09: 21605297-21608142 Phaseolus vulgaris
Phvul.009G144300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21605297-21607296 Phaseolus vulgaris
Phvul.009G144300 5.0kb upstream 5.0kb upstream 5846 true Chr09: 21607297-21613142 Phaseolus vulgaris
Phvul.009G144300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21608143-21613142 Phaseolus vulgaris
Phvul.009G144300 5.0kb downstream 5.0kb downstream 5846 true Chr09: 21602297-21608142 Phaseolus vulgaris
Phvul.009G144300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21602297-21607296 Phaseolus vulgaris
Phvul.009G144300 10.0kb upstream 10.0kb upstream 10846 true Chr09: 21607297-21618142 Phaseolus vulgaris
Phvul.009G144300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21608143-21618142 Phaseolus vulgaris
Phvul.009G144300 10.0kb downstream 10.0kb downstream 10846 true Chr09: 21597297-21608142 Phaseolus vulgaris
Phvul.009G144300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21597297-21607296 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304898 5265 Fabidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.27375 0.0 26.917    
cufflinks 16.8712 0.0 46.33    
cufflinks 5.37232 0.0 16.7289    
cufflinks 3.99253 0.0 12.5194   Low
cufflinks 39.3202 0.0 102.008 High High
cufflinks 3.16986 0.0 10.4349   Low
cufflinks 8.31929 0.0 24.2205    
cufflinks 25.1423 0.0 66.8532   High
cufflinks 9.949 0.0 28.4284    
cufflinks 17.331 0.0 47.4663    
cufflinks 22.322 0.0 59.4744    

0 Strain