Gene : Phvul.009G132800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12802:SF2 - SWI/SNF COMPLEX SUBUNIT SWI3A Genomic Order:  1367
Name:  ? Phvul.009G132800 Secondary Identifier:  ? PAC:37151289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G132800 0.5kb upstream 0.5kb upstream 5372 true Chr09: 20063639-20069010 Phaseolus vulgaris
Phvul.009G132800 0.5kb upstream 0.5kb upstream 500 false Chr09: 20068511-20069010 Phaseolus vulgaris
Phvul.009G132800 0.5kb downstream 0.5kb downstream 5372 true Chr09: 20063139-20068510 Phaseolus vulgaris
Phvul.009G132800 0.5kb downstream 0.5kb downstream 500 false Chr09: 20063139-20063638 Phaseolus vulgaris
Phvul.009G132800 1.0kb upstream 1.0kb upstream 5872 true Chr09: 20063639-20069510 Phaseolus vulgaris
Phvul.009G132800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 20068511-20069510 Phaseolus vulgaris
Phvul.009G132800 1.0kb downstream 1.0kb downstream 5872 true Chr09: 20062639-20068510 Phaseolus vulgaris
Phvul.009G132800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 20062639-20063638 Phaseolus vulgaris
Phvul.009G132800 2.0kb upstream 2.0kb upstream 6872 true Chr09: 20063639-20070510 Phaseolus vulgaris
Phvul.009G132800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 20068511-20070510 Phaseolus vulgaris
Phvul.009G132800 2.0kb downstream 2.0kb downstream 6872 true Chr09: 20061639-20068510 Phaseolus vulgaris
Phvul.009G132800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 20061639-20063638 Phaseolus vulgaris
Phvul.009G132800 5.0kb upstream 5.0kb upstream 9872 true Chr09: 20063639-20073510 Phaseolus vulgaris
Phvul.009G132800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 20068511-20073510 Phaseolus vulgaris
Phvul.009G132800 5.0kb downstream 5.0kb downstream 9872 true Chr09: 20058639-20068510 Phaseolus vulgaris
Phvul.009G132800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 20058639-20063638 Phaseolus vulgaris
Phvul.009G132800 10.0kb upstream 10.0kb upstream 14872 true Chr09: 20063639-20078510 Phaseolus vulgaris
Phvul.009G132800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 20068511-20078510 Phaseolus vulgaris
Phvul.009G132800 10.0kb downstream 10.0kb downstream 14872 true Chr09: 20053639-20068510 Phaseolus vulgaris
Phvul.009G132800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 20053639-20063638 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300791 5265 Fabidae View MSA
124065857 5270 Rosid View MSA
123740148 5271 Pentapetalae View MSA
122792229 5272 Eudicot View MSA
122044148 5273 Angiosperm View MSA
121349753 5274 Embryophyte View MSA
123381428 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0569 0.0 33.4083    
cufflinks 10.4937 0.0 34.9159    
cufflinks 9.04845 0.0 30.6624    
cufflinks 7.34051 0.0 22.6909   Low
cufflinks 8.77322 0.0 30.0587    
cufflinks 8.1801 0.0 28.4091   Low
cufflinks 10.3859 0.0 34.2724    
cufflinks 9.76423 0.0 32.545    
cufflinks 9.79232 0.0 32.6333    
cufflinks 11.7726 0.0 38.5524   High
cufflinks 8.94311 0.0 30.3671    

0 Strain