Gene : Phvul.009G130000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11945:SF97 - FLORAL HOMEOTIC PROTEIN PISTILLATA Genomic Order:  1339
Name:  ? Phvul.009G130000 Secondary Identifier:  ? PAC:37150879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G130000 0.5kb upstream 0.5kb upstream 3732 true Chr09: 19689373-19693104 Phaseolus vulgaris
Phvul.009G130000 0.5kb upstream 0.5kb upstream 500 false Chr09: 19689373-19689872 Phaseolus vulgaris
Phvul.009G130000 0.5kb downstream 0.5kb downstream 3732 true Chr09: 19689873-19693604 Phaseolus vulgaris
Phvul.009G130000 0.5kb downstream 0.5kb downstream 500 false Chr09: 19693105-19693604 Phaseolus vulgaris
Phvul.009G130000 1.0kb upstream 1.0kb upstream 4232 true Chr09: 19688873-19693104 Phaseolus vulgaris
Phvul.009G130000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19688873-19689872 Phaseolus vulgaris
Phvul.009G130000 1.0kb downstream 1.0kb downstream 4232 true Chr09: 19689873-19694104 Phaseolus vulgaris
Phvul.009G130000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19693105-19694104 Phaseolus vulgaris
Phvul.009G130000 2.0kb upstream 2.0kb upstream 5232 true Chr09: 19687873-19693104 Phaseolus vulgaris
Phvul.009G130000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19687873-19689872 Phaseolus vulgaris
Phvul.009G130000 2.0kb downstream 2.0kb downstream 5232 true Chr09: 19689873-19695104 Phaseolus vulgaris
Phvul.009G130000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19693105-19695104 Phaseolus vulgaris
Phvul.009G130000 5.0kb upstream 5.0kb upstream 8232 true Chr09: 19684873-19693104 Phaseolus vulgaris
Phvul.009G130000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19684873-19689872 Phaseolus vulgaris
Phvul.009G130000 5.0kb downstream 5.0kb downstream 8232 true Chr09: 19689873-19698104 Phaseolus vulgaris
Phvul.009G130000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19693105-19698104 Phaseolus vulgaris
Phvul.009G130000 10.0kb upstream 10.0kb upstream 13232 true Chr09: 19679873-19693104 Phaseolus vulgaris
Phvul.009G130000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19679873-19689872 Phaseolus vulgaris
Phvul.009G130000 10.0kb downstream 10.0kb downstream 13232 true Chr09: 19689873-19703104 Phaseolus vulgaris
Phvul.009G130000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19693105-19703104 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311902 5265 Fabidae View MSA
124070458 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 131.497 0.0 358.046 High High
cufflinks 0.0918641 0.0 0.408841 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 243.311 0.0 701.771 High High
cufflinks 0.060621 0.0 0.284649 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0353404 0.0 0.174441 Low  
cufflinks 0.0342293 0.0 0.169813 Low  

0 Strain