Gene : Phvul.009G117500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  1210
Name:  ? Phvul.009G117500 Secondary Identifier:  ? PAC:37148716
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G117500 0.5kb upstream 0.5kb upstream 7064 true Chr09: 18065525-18072588 Phaseolus vulgaris
Phvul.009G117500 0.5kb upstream 0.5kb upstream 500 false Chr09: 18065525-18066024 Phaseolus vulgaris
Phvul.009G117500 0.5kb downstream 0.5kb downstream 7064 true Chr09: 18066025-18073088 Phaseolus vulgaris
Phvul.009G117500 0.5kb downstream 0.5kb downstream 500 false Chr09: 18072589-18073088 Phaseolus vulgaris
Phvul.009G117500 1.0kb upstream 1.0kb upstream 7564 true Chr09: 18065025-18072588 Phaseolus vulgaris
Phvul.009G117500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18065025-18066024 Phaseolus vulgaris
Phvul.009G117500 1.0kb downstream 1.0kb downstream 7564 true Chr09: 18066025-18073588 Phaseolus vulgaris
Phvul.009G117500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18072589-18073588 Phaseolus vulgaris
Phvul.009G117500 2.0kb upstream 2.0kb upstream 8564 true Chr09: 18064025-18072588 Phaseolus vulgaris
Phvul.009G117500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18064025-18066024 Phaseolus vulgaris
Phvul.009G117500 2.0kb downstream 2.0kb downstream 8564 true Chr09: 18066025-18074588 Phaseolus vulgaris
Phvul.009G117500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18072589-18074588 Phaseolus vulgaris
Phvul.009G117500 5.0kb upstream 5.0kb upstream 11564 true Chr09: 18061025-18072588 Phaseolus vulgaris
Phvul.009G117500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18061025-18066024 Phaseolus vulgaris
Phvul.009G117500 5.0kb downstream 5.0kb downstream 11564 true Chr09: 18066025-18077588 Phaseolus vulgaris
Phvul.009G117500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18072589-18077588 Phaseolus vulgaris
Phvul.009G117500 10.0kb upstream 10.0kb upstream 16564 true Chr09: 18056025-18072588 Phaseolus vulgaris
Phvul.009G117500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18056025-18066024 Phaseolus vulgaris
Phvul.009G117500 10.0kb downstream 10.0kb downstream 16564 true Chr09: 18066025-18082588 Phaseolus vulgaris
Phvul.009G117500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18072589-18082588 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122252874 5265 Fabidae Singleton cluster - no MSA
124068397 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.52854 0.0 13.403   Low
cufflinks 6.66444 0.0 18.8887    
cufflinks 8.41871 0.0 23.323   High
cufflinks 5.83777 0.0 16.7788    
cufflinks 7.54255 0.0 21.2081    
cufflinks 6.48191 0.0 18.4123    
cufflinks 7.61687 0.0 21.259    
cufflinks 6.56142 0.0 18.5434    
cufflinks 6.03831 0.0 17.209    
cufflinks 6.681 0.0 18.9573    
cufflinks 7.61379 0.0 21.3727    

0 Strain