Gene : Phvul.009G123500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33558:SF1 - GLUTAREDOXIN-LIKE PROTEIN C5ORF63 Genomic Order:  1272
Name:  ? Phvul.009G123500 Secondary Identifier:  ? PAC:37148769
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G123500 0.5kb upstream 0.5kb upstream 7910 true Chr09: 18822620-18830529 Phaseolus vulgaris
Phvul.009G123500 0.5kb upstream 0.5kb upstream 500 false Chr09: 18822620-18823119 Phaseolus vulgaris
Phvul.009G123500 0.5kb downstream 0.5kb downstream 7910 true Chr09: 18823120-18831029 Phaseolus vulgaris
Phvul.009G123500 0.5kb downstream 0.5kb downstream 500 false Chr09: 18830530-18831029 Phaseolus vulgaris
Phvul.009G123500 1.0kb upstream 1.0kb upstream 8410 true Chr09: 18822120-18830529 Phaseolus vulgaris
Phvul.009G123500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18822120-18823119 Phaseolus vulgaris
Phvul.009G123500 1.0kb downstream 1.0kb downstream 8410 true Chr09: 18823120-18831529 Phaseolus vulgaris
Phvul.009G123500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18830530-18831529 Phaseolus vulgaris
Phvul.009G123500 2.0kb upstream 2.0kb upstream 9410 true Chr09: 18821120-18830529 Phaseolus vulgaris
Phvul.009G123500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18821120-18823119 Phaseolus vulgaris
Phvul.009G123500 2.0kb downstream 2.0kb downstream 9410 true Chr09: 18823120-18832529 Phaseolus vulgaris
Phvul.009G123500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18830530-18832529 Phaseolus vulgaris
Phvul.009G123500 5.0kb upstream 5.0kb upstream 12410 true Chr09: 18818120-18830529 Phaseolus vulgaris
Phvul.009G123500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18818120-18823119 Phaseolus vulgaris
Phvul.009G123500 5.0kb downstream 5.0kb downstream 12410 true Chr09: 18823120-18835529 Phaseolus vulgaris
Phvul.009G123500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18830530-18835529 Phaseolus vulgaris
Phvul.009G123500 10.0kb upstream 10.0kb upstream 17410 true Chr09: 18813120-18830529 Phaseolus vulgaris
Phvul.009G123500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18813120-18823119 Phaseolus vulgaris
Phvul.009G123500 10.0kb downstream 10.0kb downstream 17410 true Chr09: 18823120-18840529 Phaseolus vulgaris
Phvul.009G123500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18830530-18840529 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309711 5265 Fabidae View MSA
124064926 5270 Rosid View MSA
123740541 5271 Pentapetalae View MSA
122792582 5272 Eudicot View MSA
122044698 5273 Angiosperm View MSA
121310329 5274 Embryophyte View MSA
123427711 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5418 0.0 88.2836    
cufflinks 30.241 0.0 113.684    
cufflinks 20.387 0.0 81.3488    
cufflinks 43.5832 0.0 152.15 High High
cufflinks 22.8822 0.0 91.1715    
cufflinks 15.1817 0.0 67.9389   Low
cufflinks 24.967 0.0 96.6859    
cufflinks 39.27 0.0 137.847 High High
cufflinks 23.7213 0.0 95.8082    
cufflinks 22.4537 0.0 90.1426    
cufflinks 28.6117 0.0 108.374    

0 Strain