Gene : Phvul.009G125000 P. vulgaris v2.1
Genomic Order:  1288 Name:  ? Phvul.009G125000
Secondary Identifier:  ? PAC:37150906
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G125000 0.5kb upstream 0.5kb upstream 3255 true Chr09: 19094159-19097413 Phaseolus vulgaris
Phvul.009G125000 0.5kb upstream 0.5kb upstream 500 false Chr09: 19096914-19097413 Phaseolus vulgaris
Phvul.009G125000 0.5kb downstream 0.5kb downstream 3255 true Chr09: 19093659-19096913 Phaseolus vulgaris
Phvul.009G125000 0.5kb downstream 0.5kb downstream 500 false Chr09: 19093659-19094158 Phaseolus vulgaris
Phvul.009G125000 1.0kb upstream 1.0kb upstream 3755 true Chr09: 19094159-19097913 Phaseolus vulgaris
Phvul.009G125000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19096914-19097913 Phaseolus vulgaris
Phvul.009G125000 1.0kb downstream 1.0kb downstream 3755 true Chr09: 19093159-19096913 Phaseolus vulgaris
Phvul.009G125000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19093159-19094158 Phaseolus vulgaris
Phvul.009G125000 2.0kb upstream 2.0kb upstream 4755 true Chr09: 19094159-19098913 Phaseolus vulgaris
Phvul.009G125000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19096914-19098913 Phaseolus vulgaris
Phvul.009G125000 2.0kb downstream 2.0kb downstream 4755 true Chr09: 19092159-19096913 Phaseolus vulgaris
Phvul.009G125000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19092159-19094158 Phaseolus vulgaris
Phvul.009G125000 5.0kb upstream 5.0kb upstream 7755 true Chr09: 19094159-19101913 Phaseolus vulgaris
Phvul.009G125000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19096914-19101913 Phaseolus vulgaris
Phvul.009G125000 5.0kb downstream 5.0kb downstream 7755 true Chr09: 19089159-19096913 Phaseolus vulgaris
Phvul.009G125000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19089159-19094158 Phaseolus vulgaris
Phvul.009G125000 10.0kb upstream 10.0kb upstream 12755 true Chr09: 19094159-19106913 Phaseolus vulgaris
Phvul.009G125000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19096914-19106913 Phaseolus vulgaris
Phvul.009G125000 10.0kb downstream 10.0kb downstream 12755 true Chr09: 19084159-19096913 Phaseolus vulgaris
Phvul.009G125000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19084159-19094158 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296267 5265 Fabidae View MSA
124065245 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.07834 0.0 17.3964    
cufflinks 1.30682 0.0 8.5356    
cufflinks 0.182537 0.0 0.774107 Low Low
cufflinks 1.27172 0.0 7.87747    
cufflinks 1.21929 0.0 5.50532    
cufflinks 0.644907 0.0 3.03702    
cufflinks 4.17798 0.0 17.7535   High
cufflinks 2.91434 0.0 13.5554    
cufflinks 4.6762 0.0 19.4401   High
cufflinks 2.34833 0.0 8.90792    
cufflinks 1.32505 0.0 7.63728    

0 Strain