Gene : Phvul.006G218100 P. vulgaris v2.1
Defline:  (1 of 1) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase Genomic Order:  2199
Name:  ? Phvul.006G218100 Secondary Identifier:  ? PAC:37172823
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris HISTSYN-PWY Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G218100 0.5kb upstream 0.5kb upstream 4726 true Chr06: 30995020-30999745 Phaseolus vulgaris
Phvul.006G218100 0.5kb upstream 0.5kb upstream 500 false Chr06: 30995020-30995519 Phaseolus vulgaris
Phvul.006G218100 0.5kb downstream 0.5kb downstream 4726 true Chr06: 30995520-31000245 Phaseolus vulgaris
Phvul.006G218100 0.5kb downstream 0.5kb downstream 500 false Chr06: 30999746-31000245 Phaseolus vulgaris
Phvul.006G218100 1.0kb upstream 1.0kb upstream 5226 true Chr06: 30994520-30999745 Phaseolus vulgaris
Phvul.006G218100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30994520-30995519 Phaseolus vulgaris
Phvul.006G218100 1.0kb downstream 1.0kb downstream 5226 true Chr06: 30995520-31000745 Phaseolus vulgaris
Phvul.006G218100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30999746-31000745 Phaseolus vulgaris
Phvul.006G218100 2.0kb upstream 2.0kb upstream 6226 true Chr06: 30993520-30999745 Phaseolus vulgaris
Phvul.006G218100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30993520-30995519 Phaseolus vulgaris
Phvul.006G218100 2.0kb downstream 2.0kb downstream 6226 true Chr06: 30995520-31001745 Phaseolus vulgaris
Phvul.006G218100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30999746-31001745 Phaseolus vulgaris
Phvul.006G218100 5.0kb upstream 5.0kb upstream 9226 true Chr06: 30990520-30999745 Phaseolus vulgaris
Phvul.006G218100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30990520-30995519 Phaseolus vulgaris
Phvul.006G218100 5.0kb downstream 5.0kb downstream 9226 true Chr06: 30995520-31004745 Phaseolus vulgaris
Phvul.006G218100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30999746-31004745 Phaseolus vulgaris
Phvul.006G218100 10.0kb upstream 10.0kb upstream 14226 true Chr06: 30985520-30999745 Phaseolus vulgaris
Phvul.006G218100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30985520-30995519 Phaseolus vulgaris
Phvul.006G218100 10.0kb downstream 10.0kb downstream 14226 true Chr06: 30995520-31009745 Phaseolus vulgaris
Phvul.006G218100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30999746-31009745 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304289 5265 Fabidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.6273 0.0 55.9272    
cufflinks 34.1003 0.0 88.6584 High  
cufflinks 66.4693 0.0 180.712 High High
cufflinks 43.5112 0.0 114.052 High High
cufflinks 24.542 0.0 63.4365    
cufflinks 39.6689 0.0 103.808 High  
cufflinks 14.204 0.0 37.1315   Low
cufflinks 14.7879 0.0 38.5601   Low
cufflinks 16.8661 0.0 43.816    
cufflinks 20.5355 0.0 53.1425    
cufflinks 21.3714 0.0 55.2798    

0 Strain