Gene : Phvul.006G211700 P. vulgaris v2.1
Defline:  (1 of 1) K13114 - pinin (PNN) Genomic Order:  2134
Name:  ? Phvul.006G211700 Secondary Identifier:  ? PAC:37173948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G211700 0.5kb upstream 0.5kb upstream 4661 true Chr06: 30520586-30525246 Phaseolus vulgaris
Phvul.006G211700 0.5kb upstream 0.5kb upstream 500 false Chr06: 30524747-30525246 Phaseolus vulgaris
Phvul.006G211700 0.5kb downstream 0.5kb downstream 4661 true Chr06: 30520086-30524746 Phaseolus vulgaris
Phvul.006G211700 0.5kb downstream 0.5kb downstream 500 false Chr06: 30520086-30520585 Phaseolus vulgaris
Phvul.006G211700 1.0kb upstream 1.0kb upstream 5161 true Chr06: 30520586-30525746 Phaseolus vulgaris
Phvul.006G211700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30524747-30525746 Phaseolus vulgaris
Phvul.006G211700 1.0kb downstream 1.0kb downstream 5161 true Chr06: 30519586-30524746 Phaseolus vulgaris
Phvul.006G211700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30519586-30520585 Phaseolus vulgaris
Phvul.006G211700 2.0kb upstream 2.0kb upstream 6161 true Chr06: 30520586-30526746 Phaseolus vulgaris
Phvul.006G211700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30524747-30526746 Phaseolus vulgaris
Phvul.006G211700 2.0kb downstream 2.0kb downstream 6161 true Chr06: 30518586-30524746 Phaseolus vulgaris
Phvul.006G211700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30518586-30520585 Phaseolus vulgaris
Phvul.006G211700 5.0kb upstream 5.0kb upstream 9161 true Chr06: 30520586-30529746 Phaseolus vulgaris
Phvul.006G211700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30524747-30529746 Phaseolus vulgaris
Phvul.006G211700 5.0kb downstream 5.0kb downstream 9161 true Chr06: 30515586-30524746 Phaseolus vulgaris
Phvul.006G211700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30515586-30520585 Phaseolus vulgaris
Phvul.006G211700 10.0kb upstream 10.0kb upstream 14161 true Chr06: 30520586-30534746 Phaseolus vulgaris
Phvul.006G211700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30524747-30534746 Phaseolus vulgaris
Phvul.006G211700 10.0kb downstream 10.0kb downstream 14161 true Chr06: 30510586-30524746 Phaseolus vulgaris
Phvul.006G211700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30510586-30520585 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300845 5265 Fabidae View MSA
124061315 5270 Rosid View MSA
123738009 5271 Pentapetalae View MSA
122786181 5272 Eudicot View MSA
122046264 5273 Angiosperm View MSA
121351481 5274 Embryophyte View MSA
123426416 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.2961 0.0 73.7773   Low
cufflinks 34.1716 0.0 111.048 High  
cufflinks 35.0138 0.0 102.929    
cufflinks 22.7005 0.0 71.801   Low
cufflinks 32.8201 0.0 109.673 High  
cufflinks 29.6931 0.0 87.2288    
cufflinks 39.5019 0.0 121.382 High  
cufflinks 43.1291 0.0 132.092 High High
cufflinks 37.7314 0.0 125.431 High  
cufflinks 49.3441 0.0 151.6 High High
cufflinks 31.6106 0.0 102.056    

0 Strain