Gene : Phvul.009G105700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11134:SF4 - AP-4 COMPLEX SUBUNIT BETA-1 Genomic Order:  1090
Name:  ? Phvul.009G105700 Secondary Identifier:  ? PAC:37150444
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G105700 0.5kb upstream 0.5kb upstream 10010 true Chr09: 16412559-16422568 Phaseolus vulgaris
Phvul.009G105700 0.5kb upstream 0.5kb upstream 500 false Chr09: 16412559-16413058 Phaseolus vulgaris
Phvul.009G105700 0.5kb downstream 0.5kb downstream 10010 true Chr09: 16413059-16423068 Phaseolus vulgaris
Phvul.009G105700 0.5kb downstream 0.5kb downstream 500 false Chr09: 16422569-16423068 Phaseolus vulgaris
Phvul.009G105700 1.0kb upstream 1.0kb upstream 10510 true Chr09: 16412059-16422568 Phaseolus vulgaris
Phvul.009G105700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16412059-16413058 Phaseolus vulgaris
Phvul.009G105700 1.0kb downstream 1.0kb downstream 10510 true Chr09: 16413059-16423568 Phaseolus vulgaris
Phvul.009G105700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16422569-16423568 Phaseolus vulgaris
Phvul.009G105700 2.0kb upstream 2.0kb upstream 11510 true Chr09: 16411059-16422568 Phaseolus vulgaris
Phvul.009G105700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16411059-16413058 Phaseolus vulgaris
Phvul.009G105700 2.0kb downstream 2.0kb downstream 11510 true Chr09: 16413059-16424568 Phaseolus vulgaris
Phvul.009G105700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16422569-16424568 Phaseolus vulgaris
Phvul.009G105700 5.0kb upstream 5.0kb upstream 14510 true Chr09: 16408059-16422568 Phaseolus vulgaris
Phvul.009G105700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16408059-16413058 Phaseolus vulgaris
Phvul.009G105700 5.0kb downstream 5.0kb downstream 14510 true Chr09: 16413059-16427568 Phaseolus vulgaris
Phvul.009G105700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16422569-16427568 Phaseolus vulgaris
Phvul.009G105700 10.0kb upstream 10.0kb upstream 19510 true Chr09: 16403059-16422568 Phaseolus vulgaris
Phvul.009G105700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16403059-16413058 Phaseolus vulgaris
Phvul.009G105700 10.0kb downstream 10.0kb downstream 19510 true Chr09: 16413059-16432568 Phaseolus vulgaris
Phvul.009G105700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16422569-16432568 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040917 5273 Angiosperm View MSA
122300849 5265 Fabidae View MSA
124062984 5270 Rosid View MSA
123740433 5271 Pentapetalae View MSA
122790083 5272 Eudicot View MSA
121346542 5274 Embryophyte View MSA
123428647 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2895 0.0 40.1286   Low
cufflinks 17.2373 0.0 71.4676    
cufflinks 12.0276 0.0 42.5256   Low
cufflinks 12.4489 0.0 48.148    
cufflinks 15.4322 0.0 60.6024    
cufflinks 15.9854 0.0 66.436    
cufflinks 15.1002 0.0 58.0567    
cufflinks 14.5394 0.0 59.8938    
cufflinks 17.1039 0.0 71.1204    
cufflinks 21.2799 0.0 89.4287   High
cufflinks 16.15 0.0 62.0138    

0 Strain