Gene : Phvul.009G109300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11062:SF108 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1128
Name:  ? Phvul.009G109300 Secondary Identifier:  ? PAC:37151313
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5980 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G109300 0.5kb upstream 0.5kb upstream 4828 true Chr09: 16888866-16893693 Phaseolus vulgaris
Phvul.009G109300 0.5kb upstream 0.5kb upstream 500 false Chr09: 16888866-16889365 Phaseolus vulgaris
Phvul.009G109300 0.5kb downstream 0.5kb downstream 4828 true Chr09: 16889366-16894193 Phaseolus vulgaris
Phvul.009G109300 0.5kb downstream 0.5kb downstream 500 false Chr09: 16893694-16894193 Phaseolus vulgaris
Phvul.009G109300 1.0kb upstream 1.0kb upstream 5328 true Chr09: 16888366-16893693 Phaseolus vulgaris
Phvul.009G109300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16888366-16889365 Phaseolus vulgaris
Phvul.009G109300 1.0kb downstream 1.0kb downstream 5328 true Chr09: 16889366-16894693 Phaseolus vulgaris
Phvul.009G109300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16893694-16894693 Phaseolus vulgaris
Phvul.009G109300 2.0kb upstream 2.0kb upstream 6328 true Chr09: 16887366-16893693 Phaseolus vulgaris
Phvul.009G109300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16887366-16889365 Phaseolus vulgaris
Phvul.009G109300 2.0kb downstream 2.0kb downstream 6328 true Chr09: 16889366-16895693 Phaseolus vulgaris
Phvul.009G109300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16893694-16895693 Phaseolus vulgaris
Phvul.009G109300 5.0kb upstream 5.0kb upstream 9328 true Chr09: 16884366-16893693 Phaseolus vulgaris
Phvul.009G109300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16884366-16889365 Phaseolus vulgaris
Phvul.009G109300 5.0kb downstream 5.0kb downstream 9328 true Chr09: 16889366-16898693 Phaseolus vulgaris
Phvul.009G109300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16893694-16898693 Phaseolus vulgaris
Phvul.009G109300 10.0kb upstream 10.0kb upstream 14328 true Chr09: 16879366-16893693 Phaseolus vulgaris
Phvul.009G109300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16879366-16889365 Phaseolus vulgaris
Phvul.009G109300 10.0kb downstream 10.0kb downstream 14328 true Chr09: 16889366-16903693 Phaseolus vulgaris
Phvul.009G109300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16893694-16903693 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122315003 5265 Fabidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05448 0.0 3.39608   Low
cufflinks 3.76178 0.0 10.5433    
cufflinks 2.25022 0.0 6.61942    
cufflinks 1.53897 0.0 4.8015   Low
cufflinks 2.52664 0.0 7.44801    
cufflinks 8.08841 0.0 21.2912   High
cufflinks 4.65259 0.0 12.7987    
cufflinks 2.06228 0.0 6.11433    
cufflinks 3.37408 0.0 9.57272    
cufflinks 3.12369 0.0 8.92633    
cufflinks 2.11513 0.0 6.34369    

0 Strain