Gene : Phvul.009G108000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33178:SF2 - PROTEIN POP3-RELATED Genomic Order:  1115
Name:  ? Phvul.009G108000 Secondary Identifier:  ? PAC:37151211
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G108000 0.5kb upstream 0.5kb upstream 2397 true Chr09: 16740012-16742408 Phaseolus vulgaris
Phvul.009G108000 0.5kb upstream 0.5kb upstream 500 false Chr09: 16740012-16740511 Phaseolus vulgaris
Phvul.009G108000 0.5kb downstream 0.5kb downstream 2397 true Chr09: 16740512-16742908 Phaseolus vulgaris
Phvul.009G108000 0.5kb downstream 0.5kb downstream 500 false Chr09: 16742409-16742908 Phaseolus vulgaris
Phvul.009G108000 1.0kb upstream 1.0kb upstream 2897 true Chr09: 16739512-16742408 Phaseolus vulgaris
Phvul.009G108000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16739512-16740511 Phaseolus vulgaris
Phvul.009G108000 1.0kb downstream 1.0kb downstream 2897 true Chr09: 16740512-16743408 Phaseolus vulgaris
Phvul.009G108000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16742409-16743408 Phaseolus vulgaris
Phvul.009G108000 2.0kb upstream 2.0kb upstream 3897 true Chr09: 16738512-16742408 Phaseolus vulgaris
Phvul.009G108000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16738512-16740511 Phaseolus vulgaris
Phvul.009G108000 2.0kb downstream 2.0kb downstream 3897 true Chr09: 16740512-16744408 Phaseolus vulgaris
Phvul.009G108000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16742409-16744408 Phaseolus vulgaris
Phvul.009G108000 5.0kb upstream 5.0kb upstream 6897 true Chr09: 16735512-16742408 Phaseolus vulgaris
Phvul.009G108000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16735512-16740511 Phaseolus vulgaris
Phvul.009G108000 5.0kb downstream 5.0kb downstream 6897 true Chr09: 16740512-16747408 Phaseolus vulgaris
Phvul.009G108000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16742409-16747408 Phaseolus vulgaris
Phvul.009G108000 10.0kb upstream 10.0kb upstream 11897 true Chr09: 16730512-16742408 Phaseolus vulgaris
Phvul.009G108000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16730512-16740511 Phaseolus vulgaris
Phvul.009G108000 10.0kb downstream 10.0kb downstream 11897 true Chr09: 16740512-16752408 Phaseolus vulgaris
Phvul.009G108000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16742409-16752408 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307670 5265 Fabidae View MSA
124065488 5270 Rosid View MSA
123749354 5271 Pentapetalae View MSA
122788485 5272 Eudicot View MSA
122046282 5273 Angiosperm View MSA
121347337 5274 Embryophyte View MSA
123380530 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.0843 0.0 179.562 High  
cufflinks 40.095 0.0 107.077 High  
cufflinks 71.4193 0.0 185.116 High  
cufflinks 114.968 0.0 297.439 High High
cufflinks 38.723 0.0 104.294 High  
cufflinks 38.001 0.0 101.939 High  
cufflinks 30.2603 0.0 82.7524 High  
cufflinks 96.0583 0.0 248.327 High High
cufflinks 30.1478 0.0 82.4428 High  
cufflinks 14.2863 0.0 42.1203   Low
cufflinks 44.2986 0.0 117.813 High  

0 Strain