Gene : Phvul.009G098500 P. vulgaris v2.1
Defline:  (1 of 3) K08490 - syntaxin 5 (STX5) Genomic Order:  1015
Name:  ? Phvul.009G098500 Secondary Identifier:  ? PAC:37151334
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G098500 0.5kb upstream 0.5kb upstream 6796 true Chr09: 15516150-15522945 Phaseolus vulgaris
Phvul.009G098500 0.5kb upstream 0.5kb upstream 500 false Chr09: 15522446-15522945 Phaseolus vulgaris
Phvul.009G098500 0.5kb downstream 0.5kb downstream 6796 true Chr09: 15515650-15522445 Phaseolus vulgaris
Phvul.009G098500 0.5kb downstream 0.5kb downstream 500 false Chr09: 15515650-15516149 Phaseolus vulgaris
Phvul.009G098500 1.0kb upstream 1.0kb upstream 7296 true Chr09: 15516150-15523445 Phaseolus vulgaris
Phvul.009G098500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 15522446-15523445 Phaseolus vulgaris
Phvul.009G098500 1.0kb downstream 1.0kb downstream 7296 true Chr09: 15515150-15522445 Phaseolus vulgaris
Phvul.009G098500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 15515150-15516149 Phaseolus vulgaris
Phvul.009G098500 2.0kb upstream 2.0kb upstream 8296 true Chr09: 15516150-15524445 Phaseolus vulgaris
Phvul.009G098500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 15522446-15524445 Phaseolus vulgaris
Phvul.009G098500 2.0kb downstream 2.0kb downstream 8296 true Chr09: 15514150-15522445 Phaseolus vulgaris
Phvul.009G098500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 15514150-15516149 Phaseolus vulgaris
Phvul.009G098500 5.0kb upstream 5.0kb upstream 11296 true Chr09: 15516150-15527445 Phaseolus vulgaris
Phvul.009G098500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 15522446-15527445 Phaseolus vulgaris
Phvul.009G098500 5.0kb downstream 5.0kb downstream 11296 true Chr09: 15511150-15522445 Phaseolus vulgaris
Phvul.009G098500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 15511150-15516149 Phaseolus vulgaris
Phvul.009G098500 10.0kb upstream 10.0kb upstream 16296 true Chr09: 15516150-15532445 Phaseolus vulgaris
Phvul.009G098500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 15522446-15532445 Phaseolus vulgaris
Phvul.009G098500 10.0kb downstream 10.0kb downstream 16296 true Chr09: 15506150-15522445 Phaseolus vulgaris
Phvul.009G098500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 15506150-15516149 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311439 5265 Fabidae View MSA
124069963 5270 Rosid View MSA
123741703 5271 Pentapetalae View MSA
122789258 5272 Eudicot View MSA
122042790 5273 Angiosperm View MSA
121345451 5274 Embryophyte View MSA
123424461 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6881 0.0 39.6224   Low
cufflinks 15.095 0.0 45.9322    
cufflinks 15.4515 0.0 47.3642    
cufflinks 17.9606 0.0 53.5771    
cufflinks 18.4199 0.0 54.9432    
cufflinks 16.0747 0.0 49.7857    
cufflinks 18.0254 0.0 53.3474    
cufflinks 13.8784 0.0 42.6215   Low
cufflinks 17.0164 0.0 50.5661    
cufflinks 18.9783 0.0 61.9479    
cufflinks 21.4314 0.0 62.8492   High

0 Strain